FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0261436 through 18771 annotations produced 1 hits

():

Annotation Number : CG18143
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0261436
Gbrowse : chr3R:53160-54971 (-) // 100.0 //
Probeset : 1636085_at
Accessions : protein= NP_649439;, nucleotide= NM_141182;
Interpro : 0004153 // dihydropterin deaminase activity // inferred from direct assay /// 0005515 // protein binding // inferred fro
FlyMine data for FBgn0261436.
VDRC has 1 RNAi stocks for FBgn0261436 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	73 ± 2	4 of 4	0.40	Down
Head	244 ± 20	4 of 4	1.40	Up
Eye	373 ± 20	4 of 4	2.10	Up
Thoracicoabdominal ganglion	49 ± 5	4 of 4	0.30	Down
Salivary gland	87 ± 7	4 of 4	0.49	Down
Crop	172 ± 3	4 of 4	1.00	None
Midgut	272 ± 5	4 of 4	1.50	Up
Tubule	193 ± 7	4 of 4	1.10	Up
Hindgut	145 ± 7	4 of 4	0.80	Down
Heart	320 ± 36	4 of 4	1.80	Up
Fat body	450 ± 57	4 of 4	2.53	Up
Ovary	203 ± 3	4 of 4	1.10	Up
Testis	28 ± 2	4 of 4	0.20	Down
Male accessory glands	213 ± 11	4 of 4	1.20	Up
Virgin spermatheca	738 ± 25	4 of 4	4.15	Up
Mated spermatheca	641 ± 68	4 of 4	3.60	Up
Adult carcass	349 ± 30	4 of 4	2.00	Up
Larval CNS	102 ± 4	4 of 4	0.57	Down
Larval Salivary gland	141 ± 6	4 of 4	0.80	Down
Larval midgut	232 ± 5	4 of 4	1.31	Up
Larval tubule	88 ± 2	4 of 4	0.50	Down
Larval hindgut	109 ± 3	4 of 4	0.61	Down
Larval fat body	226 ± 24	4 of 4	1.30	None
Larval trachea	136 ± 4	4 of 4	0.77	Down
Larval carcass	114 ± 3	4 of 4	0.64	Down
S2 cells (growing)	247 ± 6	4 of 4	1.39	Up
Whole fly	177 ± 6	4 of 4

Looking for FBgn0261436. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720