FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0261509 through 18771 annotations produced 1 hits

():

Annotation Number : CG14351
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0261509
Gbrowse : chr2L:1555158-1607617 (+) // 100.0 //
Probeset : 1631311_at
Accessions : protein= NP_608607;, nucleotide= NM_134763;
Interpro : 0005515 // protein binding // inferred from electronic annotation
FlyMine data for FBgn0261509.
Homophila reports that CG14351 is a close match (1e-12) to human gene NOGOR;RTN4R (NP_075380), a gene associated with {Schizophrenia, susceptibility to}, 181500 (3).
BioGrid reports that CG14351 interacts with CG8155 .
TRiP has 1 RNAi stocks for FBgn0261509 available for purchase.
VDRC has 3 RNAi stocks for FBgn0261509 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	15 ± 0	4 of 4	2.20	Up
Head	8 ± 0	0 of 4	1.20	None
Eye	7 ± 0	0 of 4	1.00	None
Thoracicoabdominal ganglion	10 ± 2	0 of 4	1.50	None
Salivary gland	5 ± 2	0 of 4	0.77	None
Crop	8 ± 2	0 of 4	1.10	None
Midgut	2 ± 0	0 of 4	0.30	Down
Tubule	4 ± 0	0 of 4	0.60	Down
Hindgut	8 ± 1	1 of 4	1.20	None
Heart	3 ± 1	0 of 4	0.45	None
Fat body	3 ± 3	0 of 4	0.51	None
Ovary	2 ± 0	0 of 4	0.40	None
Testis	3 ± 0	0 of 4	0.50	None
Male accessory glands	3 ± 1	0 of 4	0.50	None
Virgin spermatheca	1 ± 0	0 of 4	0.25	Down
Mated spermatheca	1 ± 0	0 of 4	0.17	Down
Adult carcass	3 ± 2	0 of 4	0.50	None
Larval CNS	6 ± 1	1 of 4	0.97	None
Larval Salivary gland	1 ± 0	0 of 4	0.17	Down
Larval midgut	2 ± 0	0 of 4	0.30	Down
Larval tubule	3 ± 1	0 of 4	0.50	None
Larval hindgut	46 ± 2	4 of 4	6.53	Up
Larval fat body	2 ± 0	0 of 4	0.30	Down
Larval trachea	53 ± 11	4 of 4	7.53	Up
Larval carcass	91 ± 2	4 of 4	12.88	Up
S2 cells (growing)	1 ± 0	0 of 4	0.26	Down
Whole fly	7 ± 1	1 of 4

Looking for FBgn0261509. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720