FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0261536 through 18771 annotations produced 3 hits

Tetraspanin 66A (Tsp66A):

Annotation Number : CG16991
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035786 /// FBgn0261536 /// FBgn0261537
Gbrowse : chr3L:7459569-7461362 (+) // 100.0 //
Probeset : 1631583_at
Accessions : protein= NP_523960; /// NP_729259;, nucleotide= NM_079236; /// NM_168216;
Pathway : 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred f
FlyMine data for FBgn0035786 /// FBgn0261536 /// FBgn0261537.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2 ± 1	0 of 4	0.30	None
Head	1 ± 0	0 of 4	0.20	None
Eye	0 ± 0	0 of 4	0.09	None
Thoracicoabdominal ganglion	1 ± 1	0 of 4	0.20	None
Salivary gland	1 ± 0	0 of 4	0.19	None
Crop	1 ± 0	0 of 4	0.20	None
Midgut	1 ± 0	0 of 4	0.20	None
Tubule	2 ± 0	0 of 4	0.30	Down
Hindgut	0 ± 0	0 of 4	0.10	None
Heart	0 ± 0	0 of 4	0.06	None
Fat body	2 ± 1	0 of 4	0.42	None
Ovary	0 ± 0	0 of 4	0.10	None
Testis	42 ± 4	4 of 4	6.30	Up
Male accessory glands	1 ± 0	0 of 4	0.20	None
Virgin spermatheca	0 ± 0	0 of 4	0.06	None
Mated spermatheca	1 ± 0	0 of 4	0.22	None
Adult carcass	4 ± 1	0 of 4	0.60	None
Larval CNS	0 ± 0	0 of 4	0.04	None
Larval Salivary gland	0 ± 0	0 of 4	0.13	None
Larval midgut	2 ± 0	0 of 4	0.31	None
Larval tubule	1 ± 0	0 of 4	0.20	None
Larval hindgut	0 ± 0	0 of 4	0.13	None
Larval fat body	9 ± 3	2 of 4	1.40	None
Larval trachea	1 ± 0	0 of 4	0.17	None
Larval carcass	0 ± 0	0 of 4	0.07	None
S2 cells (growing)	1 ± 0	0 of 4	0.17	None
Whole fly	6 ± 2	2 of 4

Tetraspanin 66A (Tsp66A):

Annotation Number : CG16991
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035786 /// FBgn0261536 /// FBgn0261537
Gbrowse : chr3L:7460640-7461902 (+) // 100.0 //
Probeset : 1622915_at
Accessions : protein= NP_523960; /// NP_729259;, nucleotide= NM_079236; /// NM_168216;
Pathway : 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred f
FlyMine data for FBgn0035786 /// FBgn0261536 /// FBgn0261537.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2 ± 1	0 of 4	0.00	Down
Head	2 ± 1	0 of 4	0.10	Down
Eye	3 ± 0	0 of 4	0.08	Down
Thoracicoabdominal ganglion	3 ± 0	0 of 4	0.10	Down
Salivary gland	7 ± 4	0 of 4	0.16	Down
Crop	3 ± 1	0 of 4	0.10	Down
Midgut	5 ± 0	0 of 4	0.10	Down
Tubule	2 ± 0	0 of 4	0.10	Down
Hindgut	6 ± 1	0 of 4	0.20	Down
Heart	0 ± 0	0 of 4	0.02	Down
Fat body	5 ± 4	0 of 4	0.12	Down
Ovary	1 ± 0	0 of 4	0.00	Down
Testis	769 ± 31	4 of 4	17.30	Up
Male accessory glands	6 ± 4	0 of 4	0.10	Down
Virgin spermatheca	3 ± 1	0 of 4	0.08	Down
Mated spermatheca	4 ± 1	0 of 4	0.09	Down
Adult carcass	10 ± 3	0 of 4	0.20	Down
Larval CNS	3 ± 0	0 of 4	0.07	Down
Larval Salivary gland	2 ± 0	0 of 4	0.06	Down
Larval midgut	2 ± 0	0 of 4	0.05	Down
Larval tubule	3 ± 1	0 of 4	0.10	Down
Larval hindgut	3 ± 0	0 of 4	0.07	Down
Larval fat body	51 ± 29	3 of 4	1.10	None
Larval trachea	1 ± 1	0 of 4	0.04	Down
Larval carcass	5 ± 1	0 of 4	0.11	Down
S2 cells (growing)	3 ± 0	0 of 4	0.08	Down
Whole fly	44 ± 2	4 of 4

Tetraspanin 66A (Tsp66A):

Annotation Number : CG16991
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035786 /// FBgn0261536 /// FBgn0261537
Gbrowse : chr3L:7459569-7461362 (+) // 100.0 //
Probeset : 1640468_a_at
Accessions : protein= NP_523960; /// NP_729259;, nucleotide= NM_079236; /// NM_168216;
Pathway : 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred f
FlyMine data for FBgn0035786 /// FBgn0261536 /// FBgn0261537.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2 ± 1	0 of 4	0.10	Down
Head	1 ± 0	0 of 4	0.00	Down
Eye	3 ± 1	0 of 4	0.12	Down
Thoracicoabdominal ganglion	1 ± 0	0 of 4	0.00	Down
Salivary gland	2 ± 0	0 of 4	0.06	Down
Crop	0 ± 0	0 of 4	0.00	Down
Midgut	3 ± 1	0 of 4	0.10	Down
Tubule	2 ± 0	0 of 4	0.10	Down
Hindgut	0 ± 0	0 of 4	0.00	Down
Heart	0 ± 0	0 of 4	0.02	Down
Fat body	1 ± 0	0 of 4	0.04	Down
Ovary	0 ± 0	0 of 4	0.00	Down
Testis	434 ± 23	4 of 4	14.40	Up
Male accessory glands	4 ± 1	0 of 4	0.10	Down
Virgin spermatheca	0 ± 0	0 of 4	0.02	Down
Mated spermatheca	1 ± 1	0 of 4	0.05	Down
Adult carcass	1 ± 0	0 of 4	0.00	Down
Larval CNS	2 ± 1	0 of 4	0.07	Down
Larval Salivary gland	0 ± 0	0 of 4	0.01	Down
Larval midgut	1 ± 0	0 of 4	0.06	Down
Larval tubule	0 ± 0	0 of 4	0.00	Down
Larval hindgut	1 ± 0	0 of 4	0.05	Down
Larval fat body	43 ± 25	3 of 4	1.40	None
Larval trachea	2 ± 1	0 of 4	0.07	Down
Larval carcass	1 ± 0	0 of 4	0.05	Down
S2 cells (growing)	1 ± 0	0 of 4	0.04	Down
Whole fly	30 ± 0	4 of 4

Looking for FBgn0261536. 3 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720