FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0261550 through 18771 annotations produced 2 hits

():

Annotation Number : CG5077
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0261550
Gbrowse : chr3R:16143814-16149918 (+) // 99.88 //
Probeset : 1634015_s_at
Accessions : protein= NP_001138086; /// NP_650878; /// NP_732499; /// NP_732500; /// NP_732501;, nucleotide= NM_001144614; /// NM_142621; /// NM_169892; /// NM_169893; /// NM_169894;
FlyMine data for FBgn0261550.
TRiP has 1 RNAi stocks for FBgn0261550 available for purchase.
VDRC has 5 RNAi stocks for FBgn0261550 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	500 ± 7	4 of 4	2.50	Up
Head	262 ± 6	4 of 4	1.30	Up
Eye	409 ± 19	4 of 4	2.04	Up
Thoracicoabdominal ganglion	568 ± 26	4 of 4	2.80	Up
Salivary gland	217 ± 14	4 of 4	1.08	None
Crop	262 ± 8	4 of 4	1.30	Up
Midgut	179 ± 3	4 of 4	0.90	None
Tubule	289 ± 21	4 of 4	1.40	Up
Hindgut	326 ± 15	4 of 4	1.60	Up
Heart	494 ± 40	4 of 4	2.47	Up
Fat body	449 ± 90	4 of 4	2.24	Up
Ovary	265 ± 7	4 of 4	1.30	Up
Testis	37 ± 3	4 of 4	0.20	Down
Male accessory glands	163 ± 3	4 of 4	0.80	Down
Virgin spermatheca	181 ± 9	4 of 4	0.90	None
Mated spermatheca	188 ± 6	4 of 4	0.94	None
Adult carcass	431 ± 21	4 of 4	2.20	Up
Larval CNS	204 ± 12	4 of 4	1.02	None
Larval Salivary gland	156 ± 8	1 of 4	0.78	Down
Larval midgut	321 ± 23	4 of 4	1.60	Up
Larval tubule	219 ± 2	4 of 4	1.10	None
Larval hindgut	282 ± 11	4 of 4	1.41	Up
Larval fat body	35 ± 5	2 of 4	0.20	Down
Larval trachea	151 ± 32	4 of 4	0.75	None
Larval carcass	160 ± 12	4 of 4	0.80	None
S2 cells (growing)	886 ± 9	4 of 4	4.42	Up
Whole fly	200 ± 10	4 of 4

():

Annotation Number : CG15684
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0261550
Gbrowse : chr3R:16135924-16136476 (+) // 100.0 //
Probeset : 1623619_at
Accessions : protein= NP_650877;, nucleotide= NM_142620;
FlyMine data for FBgn0261550.
TRiP has 1 RNAi stocks for FBgn0261550 available for purchase.
VDRC has 5 RNAi stocks for FBgn0261550 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	20 ± 1	2 of 4	2.50	Up
Head	9 ± 1	0 of 4	1.20	None
Eye	2 ± 1	0 of 4	0.36	Down
Thoracicoabdominal ganglion	15 ± 4	3 of 4	1.90	None
Salivary gland	18 ± 6	0 of 4	2.27	None
Crop	14 ± 1	0 of 4	1.80	Up
Midgut	6 ± 1	0 of 4	0.80	None
Tubule	4 ± 0	0 of 4	0.60	Down
Hindgut	13 ± 1	0 of 4	1.60	Up
Heart	2 ± 0	0 of 4	0.30	Down
Fat body	11 ± 2	0 of 4	1.45	None
Ovary	8 ± 0	0 of 4	1.10	None
Testis	6 ± 0	0 of 4	0.80	None
Male accessory glands	10 ± 2	0 of 4	1.30	None
Virgin spermatheca	3 ± 0	0 of 4	0.46	None
Mated spermatheca	5 ± 1	0 of 4	0.72	None
Adult carcass	7 ± 2	0 of 4	0.90	None
Larval CNS	7 ± 3	0 of 4	0.92	None
Larval Salivary gland	5 ± 2	0 of 4	0.71	None
Larval midgut	5 ± 1	0 of 4	0.63	None
Larval tubule	6 ± 2	0 of 4	0.80	None
Larval hindgut	9 ± 0	0 of 4	1.19	None
Larval fat body	12 ± 2	0 of 4	1.50	None
Larval trachea	3 ± 3	0 of 4	0.48	None
Larval carcass	6 ± 1	0 of 4	0.80	None
S2 cells (growing)	36 ± 5	4 of 4	4.55	Up
Whole fly	8 ± 1	0 of 4

Looking for FBgn0261550. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720