FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0261565 through 18771 annotations produced 3 hits

():

Annotation Number : CG11915
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0261565
Gbrowse : chr3L:16892566-16900264 (+) // 100.0 //
Probeset : 1629499_at
Accessions : protein= NP_648931;, nucleotide= NM_140674;
Interpro : 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electr
FlyMine data for FBgn0261565.
TRiP has 1 RNAi stocks for FBgn0261565 available for purchase.
VDRC has 8 RNAi stocks for FBgn0261565 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	8 ± 2	0 of 4	0.10	Down
Head	154 ± 7	4 of 4	1.70	Up
Eye	521 ± 51	4 of 4	5.59	Up
Thoracicoabdominal ganglion	17 ± 1	0 of 4	0.20	Down
Salivary gland	36 ± 3	0 of 4	0.40	Down
Crop	111 ± 5	4 of 4	1.20	None
Midgut	14 ± 2	1 of 4	0.20	Down
Tubule	14 ± 1	1 of 4	0.20	Down
Hindgut	78 ± 4	4 of 4	0.80	None
Heart	136 ± 13	4 of 4	1.47	Up
Fat body	15 ± 3	0 of 4	0.17	Down
Ovary	5 ± 1	0 of 4	0.10	Down
Testis	3 ± 0	0 of 4	0.00	Down
Male accessory glands	40 ± 2	2 of 4	0.40	Down
Virgin spermatheca	24 ± 0	0 of 4	0.26	Down
Mated spermatheca	27 ± 1	2 of 4	0.29	Down
Adult carcass	347 ± 25	4 of 4	3.70	Up
Larval CNS	5 ± 2	0 of 4	0.05	Down
Larval Salivary gland	580 ± 70	4 of 4	6.22	Up
Larval midgut	30 ± 2	4 of 4	0.32	Down
Larval tubule	8 ± 2	0 of 4	0.10	Down
Larval hindgut	61 ± 6	4 of 4	0.66	Down
Larval fat body	18 ± 5	0 of 4	0.20	Down
Larval trachea	31 ± 7	4 of 4	0.33	Down
Larval carcass	253 ± 16	4 of 4	2.72	Up
S2 cells (growing)	3 ± 1	0 of 4	0.04	Down
Whole fly	93 ± 9	4 of 4

():

Annotation Number : S.C3L002169
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0261565
Gbrowse : chr3L:16895477-16899842 (+) // 100.0 //
Probeset : 1634439_at
Accessions : protein= NP_996113;, nucleotide= NM_206391;
Interpro : 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electr
FlyMine data for FBgn0261565.
TRiP has 1 RNAi stocks for FBgn0261565 available for purchase.
VDRC has 8 RNAi stocks for FBgn0261565 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1 ± 0	0 of 4	0.00	Down
Head	11 ± 1	1 of 4	0.30	Down
Eye	42 ± 5	4 of 4	0.96	None
Thoracicoabdominal ganglion	4 ± 1	0 of 4	0.10	Down
Salivary gland	19 ± 1	1 of 4	0.45	None
Crop	6 ± 2	0 of 4	0.10	Down
Midgut	1 ± 0	0 of 4	0.00	Down
Tubule	3 ± 0	0 of 4	0.10	Down
Hindgut	7 ± 1	0 of 4	0.20	Down
Heart	7 ± 0	0 of 4	0.16	Down
Fat body	4 ± 4	0 of 4	0.11	Down
Ovary	2 ± 0	0 of 4	0.10	Down
Testis	2 ± 0	0 of 4	0.00	Down
Male accessory glands	2 ± 0	0 of 4	0.10	Down
Virgin spermatheca	3 ± 1	0 of 4	0.07	Down
Mated spermatheca	8 ± 2	0 of 4	0.18	Down
Adult carcass	221 ± 14	4 of 4	5.00	Up
Larval CNS	1 ± 0	0 of 4	0.03	Down
Larval Salivary gland	154 ± 11	4 of 4	3.53	Up
Larval midgut	2 ± 0	0 of 4	0.05	Down
Larval tubule	1 ± 0	0 of 4	0.00	Down
Larval hindgut	6 ± 1	0 of 4	0.15	Down
Larval fat body	9 ± 3	0 of 4	0.20	Down
Larval trachea	7 ± 3	1 of 4	0.16	Down
Larval carcass	4 ± 1	0 of 4	0.10	Down
S2 cells (growing)	4 ± 0	0 of 4	0.10	Down
Whole fly	43 ± 8	4 of 4

():

Annotation Number : CG32171
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0261565
Gbrowse : chr3L:16858412-16915595 (+) // 100.0 //
Probeset : 1636953_a_at
Accessions : protein= NP_001163456; /// NP_648930; /// NP_648933; /// NP_730212; /// NP_730213; /// NP_996109; /// NP_996110; /// NP_996111; /// NP_996112;, nucleotide= NM_001169985; /// NM_140673; /// NM_140676; /// NM_168694; /// NM_170635; /// NM_206387; /// NM_206388; /// NM_206389; /// NM_206390;
Interpro : 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electr
FlyMine data for FBgn0261565.
Homophila reports that CG32171 is a close match (8e-11) to human gene LMX1B;NPS1 (NP_002307), a gene associated with Nail-patella syndrome with open-angle glaucoma, 137750 (3);Nail-patella syndrome, 161200 (3).
BioGrid reports that CG32171 interacts with CG7368 CG3850 CG4193 CG9014 CG9184 CG9283 .
TRiP has 1 RNAi stocks for FBgn0261565 available for purchase.
VDRC has 8 RNAi stocks for FBgn0261565 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	308 ± 8	4 of 4	0.70	Down
Head	757 ± 66	4 of 4	1.70	Up
Eye	570 ± 30	4 of 4	1.25	None
Thoracicoabdominal ganglion	583 ± 29	4 of 4	1.30	Up
Salivary gland	1016 ± 12	4 of 4	2.23	Up
Crop	3076 ± 37	4 of 4	6.70	Up
Midgut	421 ± 14	4 of 4	0.90	None
Tubule	172 ± 35	4 of 4	0.40	Down
Hindgut	1306 ± 77	4 of 4	2.90	Up
Heart	840 ± 91	4 of 4	1.84	Up
Fat body	191 ± 23	4 of 4	0.42	Down
Ovary	68 ± 9	4 of 4	0.10	Down
Testis	88 ± 3	4 of 4	0.20	Down
Male accessory glands	533 ± 45	4 of 4	1.20	None
Virgin spermatheca	287 ± 11	4 of 4	0.63	Down
Mated spermatheca	443 ± 46	4 of 4	0.97	None
Adult carcass	1450 ± 44	4 of 4	3.20	Up
Larval CNS	84 ± 6	4 of 4	0.18	Down
Larval Salivary gland	648 ± 85	4 of 4	1.42	None
Larval midgut	281 ± 12	4 of 4	0.62	Down
Larval tubule	253 ± 22	4 of 4	0.60	Down
Larval hindgut	918 ± 30	4 of 4	2.01	Up
Larval fat body	224 ± 15	4 of 4	0.50	Down
Larval trachea	318 ± 20	4 of 4	0.70	Down
Larval carcass	1276 ± 78	4 of 4	2.79	Up
S2 cells (growing)	174 ± 1	4 of 4	0.38	Down
Whole fly	456 ± 41	4 of 4

Looking for FBgn0261565. 3 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720