FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0261570 through 18771 annotations produced 3 hits

():

Annotation Number : CG32560
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0261570
Gbrowse : chrX:17604818-17645728 (+) // 100.0 //
Probeset : 1633336_at
Accessions : protein= NP_001097012; /// NP_573240; /// NP_728095;, nucleotide= NM_001103542; /// NM_133012; /// NM_167576; /// NM_167576;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic ann
Interpro : 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred f
FlyMine data for FBgn0261570.
Homophila reports that CG32560 is a close match (7e-36) to human gene CMAVM;GAP;PKWS;RASA1 (NP_002881), a gene associated with Basal cell carcinoma, somatic (3);Capillary malformation-arteriovenous malformation, 608354 (3);Parkes Weber syndrome, 608355 (3).
BioGrid reports that CG32560 interacts with CG5735 CG8609 .
VDRC has 4 RNAi stocks for FBgn0261570 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	223 ± 8	4 of 4	3.00	Up
Head	64 ± 6	4 of 4	0.90	None
Eye	94 ± 7	4 of 4	1.28	None
Thoracicoabdominal ganglion	153 ± 3	4 of 4	2.10	Up
Salivary gland	65 ± 9	4 of 4	0.88	None
Crop	123 ± 5	4 of 4	1.70	Up
Midgut	68 ± 3	4 of 4	0.90	None
Tubule	55 ± 3	4 of 4	0.70	Down
Hindgut	132 ± 8	4 of 4	1.80	Up
Heart	49 ± 5	4 of 4	0.66	None
Fat body	45 ± 2	4 of 4	0.61	Down
Ovary	150 ± 4	4 of 4	2.00	Up
Testis	45 ± 1	4 of 4	0.60	Down
Male accessory glands	72 ± 5	4 of 4	1.00	None
Virgin spermatheca	31 ± 3	4 of 4	0.42	Down
Mated spermatheca	40 ± 2	4 of 4	0.54	Down
Adult carcass	58 ± 9	4 of 4	0.80	None
Larval CNS	176 ± 11	4 of 4	2.37	Up
Larval Salivary gland	62 ± 4	4 of 4	0.84	None
Larval midgut	64 ± 6	4 of 4	0.86	None
Larval tubule	51 ± 2	4 of 4	0.70	None
Larval hindgut	106 ± 5	4 of 4	1.44	Up
Larval fat body	43 ± 5	4 of 4	0.60	Down
Larval trachea	146 ± 11	4 of 4	1.97	Up
Larval carcass	78 ± 6	4 of 4	1.06	None
S2 cells (growing)	136 ± 6	4 of 4	1.83	Up
Whole fly	74 ± 8	4 of 4

():

Annotation Number : CG32559
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0261570
Gbrowse : chrX:17628902-17629773 (+) // 100.0 //
Probeset : 1626633_at
Accessions : protein= NP_001097012; /// NP_573240; /// NP_728095;, nucleotide= NM_001103542; /// NM_133012; /// NM_167576; /// NM_167576;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic ann
Interpro : 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred f
FlyMine data for FBgn0261570.
VDRC has 4 RNAi stocks for FBgn0261570 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1 ± 0	0 of 4	1.30	None
Head	4 ± 1	1 of 4	5.90	Up
Eye	1 ± 0	0 of 4	1.52	None
Thoracicoabdominal ganglion	4 ± 2	0 of 4	5.10	None
Salivary gland	6 ± 1	0 of 4	8.33	Up
Crop	3 ± 1	0 of 4	4.40	None
Midgut	0 ± 0	0 of 4	1.10	None
Tubule	3 ± 1	0 of 4	3.80	Up
Hindgut	1 ± 0	0 of 4	1.60	None
Heart	1 ± 0	0 of 4	1.36	None
Fat body	2 ± 1	0 of 4	3.42	None
Ovary	2 ± 0	0 of 4	2.80	None
Testis	0 ± 0	0 of 4	1.00	None
Male accessory glands	3 ± 2	0 of 4	4.70	None
Virgin spermatheca	1 ± 0	0 of 4	1.42	None
Mated spermatheca	3 ± 1	1 of 4	4.06	None
Adult carcass	4 ± 1	0 of 4	4.90	None
Larval CNS	2 ± 1	0 of 4	3.03	None
Larval Salivary gland	6 ± 2	0 of 4	8.06	None
Larval midgut	3 ± 1	0 of 4	3.79	None
Larval tubule	2 ± 0	0 of 4	2.80	None
Larval hindgut	1 ± 0	0 of 4	1.94	None
Larval fat body	3 ± 1	0 of 4	4.70	None
Larval trachea	3 ± 2	0 of 4	3.64	None
Larval carcass	0 ± 0	0 of 4	1.06	None
S2 cells (growing)	1 ± 0	0 of 4	1.36	None
Whole fly	0 ± 0	0 of 4

():

Annotation Number : CG15816
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0261570
Gbrowse : chrX:17633306-17635130 (+) // 100.0 //
Probeset : 1625545_at
Accessions : protein= NP_573241;, nucleotide= NM_133013;
Pathway : 0005622 // intracellular // inferred from electronic annotation
Interpro : 0005096 // GTPase activator activity // inferred from electronic annotation
FlyMine data for FBgn0261570.
VDRC has 4 RNAi stocks for FBgn0261570 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	0 ± 0	0 of 4	0.50	None
Head	1 ± 0	0 of 4	0.80	None
Eye	0 ± 0	0 of 4	0.63	None
Thoracicoabdominal ganglion	1 ± 0	0 of 4	0.80	None
Salivary gland	4 ± 2	0 of 4	3.33	None
Crop	1 ± 0	0 of 4	0.90	None
Midgut	6 ± 1	0 of 4	5.20	Up
Tubule	1 ± 0	0 of 4	0.90	None
Hindgut	1 ± 0	0 of 4	1.20	None
Heart	0 ± 0	0 of 4	0.63	None
Fat body	1 ± 0	0 of 4	0.92	None
Ovary	0 ± 0	0 of 4	0.50	None
Testis	1 ± 0	0 of 4	0.80	None
Male accessory glands	10 ± 4	0 of 4	8.20	None
Virgin spermatheca	1 ± 0	0 of 4	0.85	None
Mated spermatheca	0 ± 0	0 of 4	0.67	None
Adult carcass	3 ± 1	0 of 4	2.60	None
Larval CNS	0 ± 0	0 of 4	0.48	None
Larval Salivary gland	2 ± 0	0 of 4	1.79	None
Larval midgut	44 ± 1	0 of 4	33.88	Up
Larval tubule	0 ± 0	0 of 4	0.50	None
Larval hindgut	5 ± 1	0 of 4	4.25	Up
Larval fat body	1 ± 0	0 of 4	1.00	None
Larval trachea	1 ± 0	0 of 4	0.96	None
Larval carcass	1 ± 0	0 of 4	1.42	None
S2 cells (growing)	7 ± 1	0 of 4	5.87	Up
Whole fly	1 ± 0	0 of 4

Looking for FBgn0261570. 3 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720