FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0261573 through 18771 annotations produced 3 hits

():

Annotation Number : CG32535
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0261573
Gbrowse : chrX:19422673-19424937 (+) // 100.0 //
Probeset : 1636771_at
Accessions : protein= NP_001014752; /// NP_001014753; /// NP_001014754; /// NP_001014755; /// NP_001014756;, nucleotide= NM_001014752; /// NM_001014753; /// NM_001014754; /// NM_001014755; /// NM_001014756;
Pathway : DNA-dependent // inferred from direct assay"
Interpro : 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation
FlyMine data for FBgn0261573.
TRiP has 1 RNAi stocks for FBgn0261573 available for purchase.
VDRC has 5 RNAi stocks for FBgn0261573 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	370 ± 9	4 of 4	2.50	Up
Head	156 ± 6	4 of 4	1.10	None
Eye	151 ± 5	4 of 4	1.02	None
Thoracicoabdominal ganglion	318 ± 9	4 of 4	2.10	Up
Salivary gland	201 ± 12	4 of 4	1.36	Up
Crop	164 ± 4	4 of 4	1.10	Up
Midgut	136 ± 8	4 of 4	0.90	None
Tubule	193 ± 15	4 of 4	1.30	Up
Hindgut	132 ± 0	4 of 4	0.90	Down
Heart	114 ± 7	4 of 4	0.78	Down
Fat body	115 ± 9	4 of 4	0.78	Down
Ovary	305 ± 8	4 of 4	2.10	Up
Testis	33 ± 2	4 of 4	0.20	Down
Male accessory glands	248 ± 9	4 of 4	1.70	Up
Virgin spermatheca	108 ± 3	4 of 4	0.73	Down
Mated spermatheca	116 ± 10	4 of 4	0.78	Down
Adult carcass	114 ± 5	4 of 4	0.80	Down
Larval CNS	522 ± 48	4 of 4	3.52	Up
Larval Salivary gland	259 ± 7	4 of 4	1.75	Up
Larval midgut	156 ± 4	4 of 4	1.06	None
Larval tubule	156 ± 7	4 of 4	1.10	None
Larval hindgut	211 ± 3	4 of 4	1.43	Up
Larval fat body	158 ± 11	4 of 4	1.10	None
Larval trachea	269 ± 27	4 of 4	1.81	Up
Larval carcass	174 ± 5	4 of 4	1.18	Up
S2 cells (growing)	400 ± 9	4 of 4	2.70	Up
Whole fly	148 ± 2	4 of 4

():

Annotation Number : CG32534
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0261573
Gbrowse : chrX:19420873-19421365 (+) // 100.0 //
Probeset : 1623360_at
Accessions : protein= NP_728261;, nucleotide= NM_167660;
Pathway : DNA-dependent // inferred from direct assay"
Interpro : 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation
FlyMine data for FBgn0261573.
TRiP has 1 RNAi stocks for FBgn0261573 available for purchase.
VDRC has 5 RNAi stocks for FBgn0261573 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	19 ± 1	4 of 4	1.70	None
Head	5 ± 1	0 of 4	0.50	None
Eye	13 ± 2	0 of 4	1.22	None
Thoracicoabdominal ganglion	10 ± 2	1 of 4	0.90	None
Salivary gland	26 ± 2	2 of 4	2.36	Up
Crop	5 ± 2	0 of 4	0.50	None
Midgut	7 ± 2	0 of 4	0.60	None
Tubule	3 ± 0	0 of 4	0.30	Down
Hindgut	3 ± 1	0 of 4	0.30	None
Heart	5 ± 0	1 of 4	0.49	None
Fat body	7 ± 6	0 of 4	0.66	None
Ovary	9 ± 1	1 of 4	0.80	None
Testis	21 ± 2	3 of 4	1.90	None
Male accessory glands	9 ± 3	1 of 4	0.90	None
Virgin spermatheca	9 ± 2	2 of 4	0.84	None
Mated spermatheca	9 ± 1	1 of 4	0.87	None
Adult carcass	11 ± 2	0 of 4	1.00	None
Larval CNS	15 ± 3	3 of 4	1.39	None
Larval Salivary gland	6 ± 2	0 of 4	0.59	None
Larval midgut	7 ± 2	0 of 4	0.67	None
Larval tubule	5 ± 2	0 of 4	0.50	None
Larval hindgut	9 ± 2	2 of 4	0.86	None
Larval fat body	8 ± 2	0 of 4	0.80	None
Larval trachea	14 ± 4	0 of 4	1.29	None
Larval carcass	14 ± 1	0 of 4	1.28	None
S2 cells (growing)	17 ± 2	0 of 4	1.56	None
Whole fly	11 ± 3	2 of 4

():

Annotation Number : CG3878
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0261573
Gbrowse : chrX:19415961-19419874 (+) // 100.0 //
Probeset : 1623954_s_at
Accessions : protein= NP_001014752; /// NP_001014753; /// NP_001014754; /// NP_001014755; /// NP_001014756;, nucleotide= NM_001014752; /// NM_001014753; /// NM_001014754; /// NM_001014755; /// NM_001014756;
Pathway : DNA-dependent // inferred from direct assay"
Interpro : 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation
FlyMine data for FBgn0261573.
TRiP has 1 RNAi stocks for FBgn0261573 available for purchase.
VDRC has 5 RNAi stocks for FBgn0261573 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	7 ± 0	1 of 4	0.10	Down
Head	3 ± 1	1 of 4	0.00	Down
Eye	9 ± 0	3 of 4	0.06	Down
Thoracicoabdominal ganglion	8 ± 1	3 of 4	0.10	Down
Salivary gland	12 ± 3	1 of 4	0.09	Down
Crop	9 ± 0	2 of 4	0.10	Down
Midgut	5 ± 0	0 of 4	0.00	Down
Tubule	8 ± 1	1 of 4	0.10	Down
Hindgut	5 ± 1	1 of 4	0.00	Down
Heart	5 ± 0	1 of 4	0.04	Down
Fat body	5 ± 3	1 of 4	0.04	Down
Ovary	317 ± 8	4 of 4	2.20	Up
Testis	9 ± 0	4 of 4	0.10	Down
Male accessory glands	9 ± 3	0 of 4	0.10	Down
Virgin spermatheca	7 ± 0	1 of 4	0.05	Down
Mated spermatheca	7 ± 2	1 of 4	0.05	Down
Adult carcass	9 ± 1	2 of 4	0.10	Down
Larval CNS	143 ± 26	4 of 4	0.99	None
Larval Salivary gland	14 ± 1	4 of 4	0.10	Down
Larval midgut	5 ± 1	0 of 4	0.04	Down
Larval tubule	7 ± 1	1 of 4	0.00	Down
Larval hindgut	6 ± 0	2 of 4	0.05	Down
Larval fat body	14 ± 3	3 of 4	0.10	Down
Larval trachea	16 ± 4	4 of 4	0.11	Down
Larval carcass	11 ± 2	2 of 4	0.08	Down
S2 cells (growing)	10 ± 1	4 of 4	0.07	Down
Whole fly	145 ± 8	4 of 4

Looking for FBgn0261573. 3 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720