FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0261612 through 18771 annotations produced 2 hits

():

Annotation Number : CG7779
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0014462
Gbrowse : chr2R:12130649-12137234 (-) // 100.0 //
Probeset : 1635738_at
Accessions : protein= NP_477116;, nucleotide= NM_057768;
Pathway : 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electron
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0005216 // ion channel activity // inferred fro
FlyMine data for FBgn0014462.
Homophila reports that CG7779 is a close match (2e-31) to human gene HERG;KCNH2;LQT2;SQT1 (NP_742053), a gene associated with Long QT syndrome-2 (3);Short QT syndrome-1, 609620 (3);{Long QT syndrome, acquired, susceptibility to} (3).
VDRC has 5 RNAi stocks for FBgn0014462 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	58 ± 2	4 of 4	5.10	Up
Head	17 ± 1	4 of 4	1.50	None
Eye	7 ± 2	2 of 4	0.65	None
Thoracicoabdominal ganglion	45 ± 1	4 of 4	4.00	Up
Salivary gland	22 ± 3	1 of 4	1.97	Up
Crop	141 ± 7	4 of 4	12.40	Up
Midgut	26 ± 0	4 of 4	2.30	Up
Tubule	21 ± 1	4 of 4	1.90	Up
Hindgut	43 ± 2	4 of 4	3.80	Up
Heart	32 ± 7	4 of 4	2.86	None
Fat body	50 ± 22	4 of 4	4.40	Up
Ovary	2 ± 0	0 of 4	0.20	Down
Testis	14 ± 2	4 of 4	1.30	None
Male accessory glands	11 ± 2	1 of 4	1.00	None
Virgin spermatheca	17 ± 2	4 of 4	1.52	None
Mated spermatheca	26 ± 0	4 of 4	2.33	Up
Adult carcass	45 ± 8	4 of 4	4.00	Up
Larval CNS	23 ± 3	4 of 4	2.09	Up
Larval Salivary gland	2 ± 0	0 of 4	0.21	Down
Larval midgut	52 ± 3	4 of 4	4.60	Up
Larval tubule	8 ± 1	2 of 4	0.80	None
Larval hindgut	35 ± 3	4 of 4	3.13	Up
Larval fat body	9 ± 0	3 of 4	0.80	None
Larval trachea	163 ± 31	4 of 4	14.33	Up
Larval carcass	38 ± 6	4 of 4	3.33	Up
S2 cells (growing)	3 ± 1	0 of 4	0.27	Down
Whole fly	11 ± 1	3 of 4

():

Annotation Number : CG15709
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034100
Gbrowse : chr2R:12141707-12142821 (-) // 100.0 //
Probeset : 1628609_at
Accessions : protein= NP_611105;, nucleotide= NM_137261;
Interpro : 0016787 // hydrolase activity // inferred from electronic annotation
FlyMine data for FBgn0034100.
VDRC has 5 RNAi stocks for FBgn0034100 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	4 ± 0	0 of 4	2.20	None
Head	3 ± 1	0 of 4	2.00	None
Eye	2 ± 1	0 of 4	1.44	None
Thoracicoabdominal ganglion	0 ± 0	0 of 4	0.50	None
Salivary gland	1 ± 0	0 of 4	0.90	None
Crop	2 ± 1	0 of 4	1.30	None
Midgut	4 ± 1	0 of 4	2.10	None
Tubule	3 ± 0	0 of 4	1.70	None
Hindgut	2 ± 0	0 of 4	1.20	None
Heart	2 ± 0	0 of 4	1.52	None
Fat body	1 ± 0	0 of 4	0.73	None
Ovary	1 ± 0	0 of 4	0.90	None
Testis	3 ± 0	0 of 4	1.70	Up
Male accessory glands	3 ± 2	0 of 4	1.90	None
Virgin spermatheca	1 ± 0	0 of 4	0.52	None
Mated spermatheca	2 ± 1	0 of 4	1.32	None
Adult carcass	1 ± 0	0 of 4	0.90	None
Larval CNS	2 ± 0	0 of 4	1.44	None
Larval Salivary gland	1 ± 0	0 of 4	0.97	None
Larval midgut	1 ± 0	0 of 4	0.55	None
Larval tubule	5 ± 0	1 of 4	2.90	Up
Larval hindgut	1 ± 0	0 of 4	0.52	None
Larval fat body	2 ± 0	0 of 4	1.30	None
Larval trachea	1 ± 0	0 of 4	0.87	None
Larval carcass	3 ± 0	0 of 4	1.82	None
S2 cells (growing)	4 ± 2	0 of 4	2.48	None
Whole fly	1 ± 0	0 of 4

Looking for FBgn0261612. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720