FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0261613 through 18771 annotations produced 2 hits

():

Annotation Number : CG17390
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033939
Gbrowse : chr2R:10346240-10352962 (+) // 100.0 //
Probeset : 1628411_at
Accessions : protein= NP_001097315;, nucleotide= NM_001103845;
Pathway : open tracheal system // inferred from mutant phenotype /// 0045449 // regulation of transcription // inferred from elec
Interpro : 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annot
FlyMine data for FBgn0033939.
BDGP gene expression has embryonic in situ data for CG17390: 83 pix of staining in 11 body parts.
Homophila reports that CG17390 is a close match (4e-11) to human gene WT1 (NP_077742), a gene associated with Denys-Drash syndrome, 194080 (3);Frasier syndrome, 136680 (3);Mesangial sclerosis, isolated diffuse, 256370 (3);WAGR syndrome, 194072 (3);Wilms tumor, type 1, 194070 (3).
VDRC has 3 RNAi stocks for FBgn0033939 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	14 ± 2	4 of 4	10.00	Up
Head	6 ± 0	1 of 4	4.50	Up
Eye	1 ± 0	0 of 4	1.07	None
Thoracicoabdominal ganglion	10 ± 1	2 of 4	7.10	Up
Salivary gland	15 ± 4	0 of 4	10.60	Up
Crop	4 ± 1	0 of 4	3.00	None
Midgut	6 ± 1	0 of 4	4.30	None
Tubule	6 ± 0	0 of 4	4.10	Up
Hindgut	5 ± 1	1 of 4	3.90	Up
Heart	4 ± 1	0 of 4	3.12	None
Fat body	9 ± 5	2 of 4	6.10	None
Ovary	1 ± 0	0 of 4	1.00	None
Testis	1 ± 1	0 of 4	1.30	None
Male accessory glands	6 ± 2	0 of 4	4.30	None
Virgin spermatheca	10 ± 0	3 of 4	7.13	Up
Mated spermatheca	12 ± 3	2 of 4	8.30	Up
Adult carcass	4 ± 1	0 of 4	2.90	None
Larval CNS	128 ± 14	4 of 4	85.50	Up
Larval Salivary gland	5 ± 2	2 of 4	3.78	None
Larval midgut	6 ± 2	0 of 4	4.03	None
Larval tubule	4 ± 0	0 of 4	2.70	None
Larval hindgut	2 ± 0	0 of 4	1.83	None
Larval fat body	4 ± 1	0 of 4	2.80	None
Larval trachea	20 ± 2	4 of 4	13.62	Up
Larval carcass	8 ± 1	1 of 4	5.35	Up
S2 cells (growing)	4 ± 0	0 of 4	3.18	Up
Whole fly	1 ± 0	0 of 4

():

Annotation Number : CG17388
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033937
Gbrowse : chr2R:10329743-10330536 (+) // 100.0 //
Probeset : 1625306_at
Accessions : protein= NP_610965;, nucleotide= NM_137121;
Pathway : open tracheal system // inferred from mutant phenotype"
FlyMine data for FBgn0033937.
VDRC has 3 RNAi stocks for FBgn0033937 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1 ± 0	0 of 4	0.60	None
Head	0 ± 0	0 of 4	0.30	None
Eye	3 ± 1	0 of 4	1.52	None
Thoracicoabdominal ganglion	2 ± 1	0 of 4	1.10	None
Salivary gland	13 ± 4	2 of 4	5.87	None
Crop	2 ± 1	0 of 4	1.00	None
Midgut	1 ± 0	0 of 4	0.50	None
Tubule	3 ± 0	0 of 4	1.60	Up
Hindgut	4 ± 1	0 of 4	2.00	None
Heart	2 ± 0	0 of 4	1.01	None
Fat body	2 ± 1	0 of 4	1.27	None
Ovary	1 ± 0	0 of 4	0.80	None
Testis	2 ± 0	0 of 4	0.90	None
Male accessory glands	4 ± 2	0 of 4	1.90	None
Virgin spermatheca	1 ± 0	0 of 4	0.42	None
Mated spermatheca	3 ± 1	0 of 4	1.40	None
Adult carcass	5 ± 1	0 of 4	2.30	None
Larval CNS	1 ± 1	0 of 4	0.45	None
Larval Salivary gland	5 ± 1	0 of 4	2.38	None
Larval midgut	1 ± 0	0 of 4	0.55	None
Larval tubule	3 ± 1	0 of 4	1.60	None
Larval hindgut	2 ± 1	0 of 4	0.90	None
Larval fat body	2 ± 1	0 of 4	1.00	None
Larval trachea	2 ± 2	0 of 4	1.01	None
Larval carcass	2 ± 0	0 of 4	0.96	None
S2 cells (growing)	0 ± 0	0 of 4	0.25	None
Whole fly	2 ± 0	0 of 4

Looking for FBgn0261613. 2 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720