FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0261617 through 18771 annotations produced 2 hits

():

Annotation Number : CG15321
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0015624
Gbrowse : chrX:9576997-9577705 (-) // 100.0 //
Probeset : 1637135_at
Accessions : protein= NP_572578;, nucleotide= NM_132350;
Pathway : DNA-dependent // inferred from electronic annotation /// 0007088 // regulation of mitosis // inferred from genetic inte
Interpro : 0000123 // histone acetyltransferase complex // inferred from electronic annotation /// 0005634 // nucleus // inferred f
FlyMine data for FBgn0015624.
BioGrid reports that CG15321 interacts with CG4183 .
VDRC has 5 RNAi stocks for FBgn0015624 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	36 ± 4	4 of 4	5.10	Up
Head	6 ± 0	1 of 4	0.80	None
Eye	13 ± 0	4 of 4	1.86	Up
Thoracicoabdominal ganglion	22 ± 3	4 of 4	3.10	Up
Salivary gland	26 ± 4	1 of 4	3.62	Up
Crop	15 ± 1	2 of 4	2.10	Up
Midgut	12 ± 0	0 of 4	1.70	Up
Tubule	10 ± 1	1 of 4	1.50	Up
Hindgut	10 ± 1	0 of 4	1.40	None
Heart	19 ± 2	4 of 4	2.72	Up
Fat body	14 ± 1	1 of 4	2.02	Up
Ovary	25 ± 2	4 of 4	3.50	Up
Testis	9 ± 0	2 of 4	1.30	None
Male accessory glands	13 ± 1	0 of 4	1.80	Up
Virgin spermatheca	9 ± 1	1 of 4	1.33	None
Mated spermatheca	12 ± 3	0 of 4	1.74	None
Adult carcass	8 ± 3	0 of 4	1.10	None
Larval CNS	19 ± 5	4 of 4	2.69	Up
Larval Salivary gland	19 ± 3	2 of 4	2.65	Up
Larval midgut	10 ± 0	0 of 4	1.40	None
Larval tubule	12 ± 2	0 of 4	1.70	None
Larval hindgut	9 ± 2	1 of 4	1.26	None
Larval fat body	10 ± 1	0 of 4	1.50	None
Larval trachea	27 ± 3	4 of 4	3.81	Up
Larval carcass	11 ± 0	0 of 4	1.63	None
S2 cells (growing)	4 ± 1	0 of 4	0.64	None
Whole fly	7 ± 1	1 of 4

():

Annotation Number : CG15319
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0015624
Gbrowse : chrX:9563250-9576909 (-) // 99.9 //
Probeset : 1622925_at
Accessions : protein= NP_524642;, nucleotide= NM_079903;
Pathway : DNA-dependent // inferred from electronic annotation /// 0007088 // regulation of mitosis // inferred from genetic inte
Interpro : 0000123 // histone acetyltransferase complex // inferred from electronic annotation /// 0005634 // nucleus // inferred f
FlyMine data for FBgn0015624.
Homophila reports that CG15319 is a close match (0) to human gene CBP;CREBBP;RSTS (NP_004371), a gene associated with Rubenstein-Taybi syndrome, 180849 (3).
BioGrid reports that CG15319 interacts with CG11579 CG3263 CG2189 CG9885 CG9045 CG9045 CG9045 CG9045 CG1891 CG2621 CG3722 CG10388 CG2759 CG2125 CG2125 CG2125 CG2125 CG8887 CG1487 CG15861 CG9046 CG14534 CG17508 CG5708 CG11182 CG13510 CG14816 CG3629 CG13806 CG32139 CG5473 CG31000 CG5571 CG5650 CG7948 CG5568 CG5731 CG15218 CG31679 CG2865 CG10078 CG12723 CG4911 CG10246 CG31811 CG16892 CG8667 CG9930 CG4673 CG15112 CG4184 CG8594 CG8181 .
VDRC has 5 RNAi stocks for FBgn0015624 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	213 ± 17	4 of 4	1.60	None
Head	29 ± 5	4 of 4	0.20	Down
Eye	37 ± 5	4 of 4	0.28	Down
Thoracicoabdominal ganglion	100 ± 14	4 of 4	0.80	None
Salivary gland	53 ± 11	4 of 4	0.40	Down
Crop	87 ± 3	4 of 4	0.70	Down
Midgut	78 ± 2	4 of 4	0.60	Down
Tubule	43 ± 3	4 of 4	0.30	Down
Hindgut	86 ± 7	4 of 4	0.70	Down
Heart	56 ± 3	4 of 4	0.43	Down
Fat body	61 ± 15	4 of 4	0.47	Down
Ovary	374 ± 3	4 of 4	2.80	Up
Testis	48 ± 6	4 of 4	0.40	Down
Male accessory glands	61 ± 6	4 of 4	0.50	Down
Virgin spermatheca	35 ± 1	4 of 4	0.27	Down
Mated spermatheca	52 ± 3	4 of 4	0.40	Down
Adult carcass	54 ± 8	4 of 4	0.40	Down
Larval CNS	162 ± 15	4 of 4	1.23	None
Larval Salivary gland	151 ± 11	4 of 4	1.14	None
Larval midgut	51 ± 3	4 of 4	0.39	Down
Larval tubule	81 ± 5	4 of 4	0.60	Down
Larval hindgut	98 ± 4	4 of 4	0.75	None
Larval fat body	86 ± 5	4 of 4	0.70	Down
Larval trachea	108 ± 11	4 of 4	0.82	None
Larval carcass	129 ± 11	4 of 4	0.98	None
S2 cells (growing)	121 ± 1	4 of 4	0.92	None
Whole fly	132 ± 12	4 of 4

Looking for FBgn0261617. 2 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720