FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0261641 through 18771 annotations produced 2 hits

():

Annotation Number : CG33097
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0053097
Gbrowse : chr3R:2190208-2194010 (-) // 100.0 //
Probeset : 1625578_at
Accessions : protein= NP_001036683; /// NP_788585;, nucleotide= NM_001043218; /// NM_176408;
Pathway : via spliceosome // inferred by curator"
Interpro : 0071011 // precatalytic spliceosome // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferre
FlyMine data for FBgn0053097.
BDGP gene expression has embryonic in situ data for CG33097: 20 pix of staining in 28 body parts.
BioGrid reports that CG33097 interacts with CG3918 .
VDRC has 6 RNAi stocks for FBgn0053097 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	61 ± 2	4 of 4	5.10	Up
Head	10 ± 1	2 of 4	0.90	None
Eye	14 ± 2	4 of 4	1.16	None
Thoracicoabdominal ganglion	50 ± 7	4 of 4	4.10	Up
Salivary gland	11 ± 4	0 of 4	0.98	None
Crop	18 ± 2	4 of 4	1.50	None
Midgut	13 ± 0	4 of 4	1.10	None
Tubule	10 ± 0	1 of 4	0.80	Down
Hindgut	24 ± 1	4 of 4	2.00	Up
Heart	12 ± 0	3 of 4	0.99	None
Fat body	8 ± 0	0 of 4	0.70	None
Ovary	26 ± 1	4 of 4	2.10	Up
Testis	26 ± 1	4 of 4	2.20	Up
Male accessory glands	30 ± 2	4 of 4	2.50	Up
Virgin spermatheca	6 ± 0	2 of 4	0.56	None
Mated spermatheca	7 ± 1	0 of 4	0.58	None
Adult carcass	12 ± 3	1 of 4	1.10	None
Larval CNS	39 ± 2	4 of 4	3.23	Up
Larval Salivary gland	18 ± 1	4 of 4	1.54	None
Larval midgut	7 ± 1	1 of 4	0.57	None
Larval tubule	17 ± 1	4 of 4	1.40	None
Larval hindgut	10 ± 0	4 of 4	0.87	None
Larval fat body	13 ± 1	2 of 4	1.10	None
Larval trachea	24 ± 3	4 of 4	2.00	Up
Larval carcass	13 ± 1	4 of 4	1.09	None
S2 cells (growing)	50 ± 4	4 of 4	4.13	Up
Whole fly	12 ± 1	4 of 4

():

Annotation Number : CG31367
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051367
Gbrowse : chr3R:2187385-2189849 (-) // 100.0 //
Probeset : 1637665_at
Accessions : protein= NP_731075;, nucleotide= NM_169138;
Pathway : via spliceosome // inferred by curator"
Interpro : 0071011 // precatalytic spliceosome // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferre
FlyMine data for FBgn0051367.
BDGP gene expression has embryonic in situ data for CG31367: 4 pix of staining in 1 body parts.
VDRC has 6 RNAi stocks for FBgn0051367 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	323 ± 19	4 of 4	3.40	Up
Head	78 ± 3	4 of 4	0.80	Down
Eye	114 ± 2	4 of 4	1.19	Up
Thoracicoabdominal ganglion	276 ± 13	4 of 4	2.90	Up
Salivary gland	111 ± 7	4 of 4	1.16	None
Crop	97 ± 2	4 of 4	1.00	None
Midgut	72 ± 4	4 of 4	0.80	Down
Tubule	153 ± 4	4 of 4	1.60	Up
Hindgut	104 ± 1	4 of 4	1.10	None
Heart	58 ± 3	4 of 4	0.61	Down
Fat body	65 ± 8	4 of 4	0.68	Down
Ovary	201 ± 4	4 of 4	2.10	Up
Testis	72 ± 2	4 of 4	0.70	Down
Male accessory glands	170 ± 6	4 of 4	1.80	Up
Virgin spermatheca	101 ± 5	4 of 4	1.05	None
Mated spermatheca	113 ± 7	4 of 4	1.17	None
Adult carcass	58 ± 3	4 of 4	0.60	Down
Larval CNS	433 ± 51	4 of 4	4.49	Up
Larval Salivary gland	201 ± 6	4 of 4	2.08	Up
Larval midgut	62 ± 3	4 of 4	0.64	Down
Larval tubule	90 ± 4	4 of 4	0.90	None
Larval hindgut	112 ± 5	4 of 4	1.17	None
Larval fat body	72 ± 8	4 of 4	0.70	None
Larval trachea	165 ± 4	4 of 4	1.72	Up
Larval carcass	137 ± 6	4 of 4	1.42	Up
S2 cells (growing)	158 ± 4	4 of 4	1.64	Up
Whole fly	96 ± 5	4 of 4

Looking for FBgn0261641. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720