FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0261671 through 18771 annotations produced 3 hits

():

Annotation Number : CG15134
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032621
Gbrowse : chr2L:16902528-16908144 (+) // 100.0 //
Probeset : 1639590_at
Accessions : protein= NP_001137831; /// NP_609823;, nucleotide= NM_001144359; /// NM_135979;
FlyMine data for FBgn0032621.
VDRC has 6 RNAi stocks for FBgn0032621 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	7 ± 0	2 of 4	0.60	Down
Head	12 ± 1	2 of 4	1.00	None
Eye	4 ± 1	1 of 4	0.36	Down
Thoracicoabdominal ganglion	4 ± 1	0 of 4	0.40	Down
Salivary gland	28 ± 8	0 of 4	2.38	None
Crop	9 ± 2	0 of 4	0.80	None
Midgut	15 ± 2	1 of 4	1.30	None
Tubule	8 ± 1	0 of 4	0.70	Down
Hindgut	12 ± 1	2 of 4	1.10	None
Heart	3 ± 1	0 of 4	0.25	Down
Fat body	15 ± 7	0 of 4	1.30	None
Ovary	9 ± 0	3 of 4	0.70	Down
Testis	8 ± 1	1 of 4	0.70	None
Male accessory glands	9 ± 2	1 of 4	0.80	None
Virgin spermatheca	10 ± 0	1 of 4	0.88	None
Mated spermatheca	10 ± 0	2 of 4	0.91	None
Adult carcass	16 ± 2	0 of 4	1.40	None
Larval CNS	6 ± 3	1 of 4	0.55	None
Larval Salivary gland	8 ± 3	0 of 4	0.71	None
Larval midgut	20 ± 4	0 of 4	1.69	None
Larval tubule	9 ± 2	2 of 4	0.80	None
Larval hindgut	8 ± 1	2 of 4	0.67	None
Larval fat body	21 ± 2	3 of 4	1.80	Up
Larval trachea	10 ± 3	2 of 4	0.90	None
Larval carcass	12 ± 1	0 of 4	1.08	None
S2 cells (growing)	16 ± 1	4 of 4	1.37	Up
Whole fly	12 ± 0	2 of 4

():

Annotation Number : CG4841
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032622
Gbrowse : chr2L:16910677-16917052 (+) // 100.0 //
Probeset : 1640750_at
Accessions : protein= NP_609824;, nucleotide= NM_135980;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0032622.
VDRC has 6 RNAi stocks for FBgn0032622 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	379 ± 6	4 of 4	4.20	Up
Head	133 ± 4	4 of 4	1.50	Up
Eye	183 ± 10	4 of 4	2.04	Up
Thoracicoabdominal ganglion	332 ± 8	4 of 4	3.70	Up
Salivary gland	171 ± 5	4 of 4	1.91	Up
Crop	126 ± 3	4 of 4	1.40	Up
Midgut	201 ± 8	4 of 4	2.20	Up
Tubule	97 ± 2	4 of 4	1.10	Up
Hindgut	119 ± 5	4 of 4	1.30	Up
Heart	171 ± 6	4 of 4	1.91	Up
Fat body	217 ± 32	4 of 4	2.43	Up
Ovary	190 ± 5	4 of 4	2.10	Up
Testis	42 ± 4	4 of 4	0.50	Down
Male accessory glands	87 ± 3	4 of 4	1.00	None
Virgin spermatheca	174 ± 13	4 of 4	1.94	Up
Mated spermatheca	192 ± 12	4 of 4	2.15	Up
Adult carcass	131 ± 10	4 of 4	1.50	Up
Larval CNS	294 ± 8	4 of 4	3.28	Up
Larval Salivary gland	152 ± 4	4 of 4	1.70	Up
Larval midgut	246 ± 16	4 of 4	2.75	Up
Larval tubule	110 ± 3	4 of 4	1.20	Up
Larval hindgut	190 ± 10	4 of 4	2.12	Up
Larval fat body	527 ± 48	4 of 4	5.90	Up
Larval trachea	138 ± 12	4 of 4	1.54	Up
Larval carcass	164 ± 9	4 of 4	1.83	Up
S2 cells (growing)	165 ± 6	4 of 4	1.85	Up
Whole fly	89 ± 2	4 of 4

():

Annotation Number : CG15133
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0260757
Gbrowse : chr2L:16889002-16898072 (+) // 100.0 //
Probeset : 1624822_at
Accessions : protein= NP_609821;, nucleotide= NM_135977;
FlyMine data for FBgn0260757.
VDRC has 6 RNAi stocks for FBgn0260757 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	4 ± 1	0 of 4	2.80	None
Head	1 ± 0	0 of 4	0.90	None
Eye	4 ± 2	0 of 4	2.77	None
Thoracicoabdominal ganglion	5 ± 1	0 of 4	3.20	None
Salivary gland	10 ± 2	0 of 4	6.77	None
Crop	5 ± 2	0 of 4	3.40	None
Midgut	3 ± 0	0 of 4	2.00	None
Tubule	2 ± 0	0 of 4	1.60	None
Hindgut	2 ± 1	0 of 4	1.80	None
Heart	4 ± 1	0 of 4	2.87	None
Fat body	5 ± 3	0 of 4	3.24	None
Ovary	2 ± 0	0 of 4	1.30	None
Testis	4 ± 1	1 of 4	3.20	None
Male accessory glands	3 ± 1	0 of 4	2.00	None
Virgin spermatheca	1 ± 0	0 of 4	1.18	None
Mated spermatheca	2 ± 0	0 of 4	1.55	None
Adult carcass	7 ± 1	0 of 4	4.50	Up
Larval CNS	2 ± 1	0 of 4	1.44	None
Larval Salivary gland	4 ± 1	0 of 4	2.63	None
Larval midgut	2 ± 0	0 of 4	1.71	None
Larval tubule	2 ± 1	0 of 4	1.70	None
Larval hindgut	2 ± 0	0 of 4	1.26	None
Larval fat body	6 ± 1	0 of 4	4.10	None
Larval trachea	2 ± 2	0 of 4	1.39	None
Larval carcass	3 ± 0	0 of 4	2.00	None
S2 cells (growing)	1 ± 0	0 of 4	1.00	None
Whole fly	1 ± 0	0 of 4

Looking for FBgn0261671. 3 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720