FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0261705 through 18771 annotations produced 2 hits

():

Annotation Number : CG9895
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034810
Gbrowse : chr2R:18899641-18901524 (-) // 100.0 //
Probeset : 1628642_at
Accessions : protein= NP_611747;, nucleotide= NM_137903;
Pathway : 0005622 // intracellular // inferred from electronic annotation
Interpro : 0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from
FlyMine data for FBgn0034810.
Homophila reports that CG9895 is a close match (7e-12) to human gene MRX92;ZNF674 (NP_001034980), a gene associated with Mental retardation, X-linked-92 (3).
VDRC has 3 RNAi stocks for FBgn0034810 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2 ± 1	0 of 4	4.60	None
Head	2 ± 1	0 of 4	6.30	None
Eye	0 ± 0	0 of 4	2.06	None
Thoracicoabdominal ganglion	1 ± 0	0 of 4	3.30	None
Salivary gland	2 ± 0	0 of 4	5.82	Up
Crop	1 ± 0	0 of 4	4.50	None
Midgut	0 ± 0	0 of 4	2.10	Up
Tubule	0 ± 0	0 of 4	1.90	Up
Hindgut	3 ± 1	0 of 4	7.40	None
Heart	0 ± 0	0 of 4	1.53	None
Fat body	0 ± 0	0 of 4	1.47	None
Ovary	0 ± 0	0 of 4	0.60	Down
Testis	1 ± 0	0 of 4	2.70	None
Male accessory glands	1 ± 0	0 of 4	3.10	None
Virgin spermatheca	0 ± 0	0 of 4	1.29	None
Mated spermatheca	0 ± 0	0 of 4	2.00	Up
Adult carcass	1 ± 0	0 of 4	3.30	None
Larval CNS	0 ± 0	0 of 4	0.82	None
Larval Salivary gland	0 ± 0	0 of 4	2.00	None
Larval midgut	0 ± 0	0 of 4	1.41	None
Larval tubule	0 ± 0	0 of 4	1.10	None
Larval hindgut	1 ± 0	0 of 4	3.41	None
Larval fat body	2 ± 1	0 of 4	5.80	None
Larval trachea	1 ± 0	0 of 4	3.41	None
Larval carcass	1 ± 0	0 of 4	2.71	None
S2 cells (growing)	0 ± 0	0 of 4	1.76	None
Whole fly	0 ± 0	0 of 4

():

Annotation Number : S.C2R002544
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085238
Gbrowse : chr2R:18928061-18928905 (-) // 94.4 //
Probeset : 1624334_at
Accessions : protein= NP_001097428;, nucleotide= NM_001103958;
FlyMine data for FBgn0085238.
VDRC has 3 RNAi stocks for FBgn0085238 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	0 ± 0	0 of 4	1.30	None
Head	1 ± 0	0 of 4	1.70	None
Eye	1 ± 0	0 of 4	2.08	None
Thoracicoabdominal ganglion	1 ± 0	0 of 4	1.90	None
Salivary gland	2 ± 0	0 of 4	4.50	Up
Crop	1 ± 0	0 of 4	2.30	Up
Midgut	2 ± 0	0 of 4	3.60	None
Tubule	0 ± 0	0 of 4	1.50	Up
Hindgut	0 ± 0	0 of 4	1.10	None
Heart	1 ± 0	0 of 4	2.04	None
Fat body	2 ± 2	0 of 4	4.17	None
Ovary	1 ± 0	0 of 4	1.70	None
Testis	0 ± 0	0 of 4	0.90	None
Male accessory glands	1 ± 0	0 of 4	2.00	None
Virgin spermatheca	0 ± 0	0 of 4	1.29	None
Mated spermatheca	0 ± 0	0 of 4	1.38	None
Adult carcass	5 ± 4	0 of 4	9.60	None
Larval CNS	0 ± 0	0 of 4	1.13	None
Larval Salivary gland	1 ± 0	0 of 4	1.75	None
Larval midgut	1 ± 0	0 of 4	2.33	None
Larval tubule	0 ± 0	0 of 4	1.20	None
Larval hindgut	0 ± 0	0 of 4	0.54	None
Larval fat body	4 ± 2	0 of 4	6.80	None
Larval trachea	0 ± 0	0 of 4	0.62	None
Larval carcass	1 ± 0	0 of 4	1.79	None
S2 cells (growing)	1 ± 0	0 of 4	1.79	None
Whole fly	0 ± 0	0 of 4

Looking for FBgn0261705. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720