FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0261723 through 18771 annotations produced 2 hits

():

Annotation Number : CG12361
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0250756
Gbrowse : chr3L:1924319-1933448 (+) // 100.0 //
Probeset : 1628145_at
Accessions : protein= NP_647677;, nucleotide= NM_139420;
Pathway : DNA-dependent // inferred from electronic annotation /// 0007411 // axon guidance // inferred from mutant phenotype ///
Interpro : 0005634 // nucleus // inferred from electronic annotation
FlyMine data for FBgn0250756.
Homophila reports that CG12361 is a close match (5e-11) to human gene (NP_002720), a gene associated with .
BioGrid reports that CG12361 interacts with CG6996 CG9173 .
VDRC has 3 RNAi stocks for FBgn0250756 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	21 ± 1	4 of 4	2.50	Up
Head	10 ± 2	1 of 4	1.20	None
Eye	3 ± 1	0 of 4	0.40	None
Thoracicoabdominal ganglion	37 ± 1	4 of 4	4.40	Up
Salivary gland	13 ± 3	0 of 4	1.55	None
Crop	8 ± 2	0 of 4	1.00	None
Midgut	11 ± 1	2 of 4	1.30	None
Tubule	7 ± 0	0 of 4	0.80	Down
Hindgut	7 ± 1	1 of 4	0.90	None
Heart	3 ± 1	0 of 4	0.37	None
Fat body	4 ± 5	0 of 4	0.48	None
Ovary	8 ± 1	1 of 4	1.00	None
Testis	4 ± 1	0 of 4	0.60	None
Male accessory glands	12 ± 5	0 of 4	1.50	None
Virgin spermatheca	3 ± 0	0 of 4	0.39	Down
Mated spermatheca	5 ± 1	0 of 4	0.63	None
Adult carcass	12 ± 3	0 of 4	1.50	None
Larval CNS	37 ± 4	4 of 4	4.42	Up
Larval Salivary gland	7 ± 2	0 of 4	0.83	None
Larval midgut	19 ± 1	3 of 4	2.33	Up
Larval tubule	7 ± 2	0 of 4	0.80	None
Larval hindgut	8 ± 2	1 of 4	0.94	None
Larval fat body	7 ± 2	0 of 4	0.80	None
Larval trachea	5 ± 3	0 of 4	0.60	None
Larval carcass	9 ± 2	0 of 4	1.12	None
S2 cells (growing)	4 ± 1	0 of 4	0.58	None
Whole fly	8 ± 1	1 of 4

():

Annotation Number : CG13925
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0250756
Gbrowse : chr3L:1921414-1922101 (+) // 100.0 //
Probeset : 1630926_at
Accessions : protein= NP_647677;, nucleotide= NM_139420;
Pathway : DNA-dependent // inferred from electronic annotation /// 0007411 // axon guidance // inferred from mutant phenotype ///
Interpro : 0005634 // nucleus // inferred from electronic annotation
FlyMine data for FBgn0250756.
VDRC has 3 RNAi stocks for FBgn0250756 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	7 ± 2	0 of 4	3.00	None
Head	3 ± 0	0 of 4	1.40	None
Eye	8 ± 1	1 of 4	3.17	None
Thoracicoabdominal ganglion	14 ± 2	0 of 4	5.50	Up
Salivary gland	19 ± 3	0 of 4	7.70	Up
Crop	3 ± 1	0 of 4	1.50	None
Midgut	8 ± 2	0 of 4	3.20	None
Tubule	3 ± 1	0 of 4	1.40	None
Hindgut	2 ± 0	0 of 4	0.80	None
Heart	2 ± 1	0 of 4	0.88	None
Fat body	16 ± 2	0 of 4	6.39	Up
Ovary	4 ± 1	0 of 4	1.80	None
Testis	2 ± 0	0 of 4	0.80	None
Male accessory glands	7 ± 2	0 of 4	2.90	None
Virgin spermatheca	11 ± 0	0 of 4	4.36	Up
Mated spermatheca	6 ± 2	0 of 4	2.59	None
Adult carcass	4 ± 2	0 of 4	1.90	None
Larval CNS	10 ± 3	0 of 4	4.17	Up
Larval Salivary gland	9 ± 2	0 of 4	3.56	None
Larval midgut	8 ± 2	0 of 4	3.21	None
Larval tubule	7 ± 1	1 of 4	2.80	Up
Larval hindgut	8 ± 2	0 of 4	3.16	None
Larval fat body	7 ± 5	0 of 4	2.90	None
Larval trachea	8 ± 2	0 of 4	3.46	Up
Larval carcass	5 ± 1	0 of 4	2.31	None
S2 cells (growing)	1 ± 0	0 of 4	0.77	None
Whole fly	2 ± 0	0 of 4

Looking for FBgn0261723. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720