FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0261789 through 18771 annotations produced 1 hits

():

Annotation Number : CG1249
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037434
Gbrowse : chr3R:2170718-2171617 (-) // 100.0 //
Probeset : 1635530_at
Accessions : protein= NP_649645;, nucleotide= NM_141388;
Pathway : via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing
Interpro : via spliceosome // inferred from sequence or structural similarity /// 0006397 // mRNA processing // inferred from elec
FlyMine data for FBgn0037434.
BioGrid reports that CG1249 interacts with CG16792 CG6610 CG8282 CG14071 .
VDRC has 3 RNAi stocks for FBgn0037434 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	465 ± 9	4 of 4	0.80	Down
Head	444 ± 24	4 of 4	0.80	Down
Eye	522 ± 14	4 of 4	0.91	None
Thoracicoabdominal ganglion	351 ± 10	4 of 4	0.60	Down
Salivary gland	336 ± 6	4 of 4	0.59	Down
Crop	580 ± 13	4 of 4	1.00	None
Midgut	326 ± 17	4 of 4	0.60	Down
Tubule	274 ± 3	4 of 4	0.50	Down
Hindgut	434 ± 4	4 of 4	0.80	Down
Heart	349 ± 10	4 of 4	0.61	Down
Fat body	345 ± 40	4 of 4	0.60	Down
Ovary	1032 ± 14	4 of 4	1.80	Up
Testis	187 ± 6	4 of 4	0.30	Down
Male accessory glands	1133 ± 32	4 of 4	2.00	Up
Virgin spermatheca	710 ± 26	4 of 4	1.24	Up
Mated spermatheca	700 ± 17	4 of 4	1.22	Up
Adult carcass	337 ± 12	4 of 4	0.60	Down
Larval CNS	1279 ± 62	4 of 4	2.24	Up
Larval Salivary gland	873 ± 23	4 of 4	1.53	Up
Larval midgut	241 ± 8	4 of 4	0.42	Down
Larval tubule	435 ± 13	4 of 4	0.80	Down
Larval hindgut	519 ± 7	4 of 4	0.91	None
Larval fat body	413 ± 35	4 of 4	0.70	Down
Larval trachea	979 ± 93	4 of 4	1.71	Up
Larval carcass	493 ± 20	4 of 4	0.86	Down
S2 cells (growing)	896 ± 24	4 of 4	1.57	Up
Whole fly	572 ± 23	4 of 4

Looking for FBgn0261789. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720