FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0261790 through 18771 annotations produced 1 hits

():

Annotation Number : CG18591
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031962
Gbrowse : chr2L:7884931-7885425 (-) // 100.0 //
Probeset : 1623250_at
Accessions : protein= NP_609162;, nucleotide= NM_135318;
Pathway : via spliceosome // inferred by curator /// 0006397 // mRNA processing // inferred from electronic annotation /// 000838
Interpro : 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 00305
FlyMine data for FBgn0031962.
BioGrid reports that CG18591 interacts with CG7768 .
VDRC has 3 RNAi stocks for FBgn0031962 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	310 ± 6	4 of 4	0.50	Down
Head	289 ± 17	4 of 4	0.40	Down
Eye	344 ± 16	4 of 4	0.53	Down
Thoracicoabdominal ganglion	338 ± 10	4 of 4	0.50	Down
Salivary gland	341 ± 21	4 of 4	0.52	Down
Crop	336 ± 10	4 of 4	0.50	Down
Midgut	250 ± 5	4 of 4	0.40	Down
Tubule	267 ± 8	4 of 4	0.40	Down
Hindgut	285 ± 8	4 of 4	0.40	Down
Heart	258 ± 9	4 of 4	0.39	Down
Fat body	218 ± 15	4 of 4	0.33	Down
Ovary	1063 ± 10	4 of 4	1.60	Up
Testis	251 ± 4	4 of 4	0.40	Down
Male accessory glands	830 ± 29	4 of 4	1.30	Up
Virgin spermatheca	347 ± 7	4 of 4	0.53	Down
Mated spermatheca	370 ± 15	4 of 4	0.57	Down
Adult carcass	185 ± 18	4 of 4	0.30	Down
Larval CNS	1123 ± 35	4 of 4	1.72	Up
Larval Salivary gland	972 ± 26	4 of 4	1.49	Up
Larval midgut	241 ± 4	4 of 4	0.37	Down
Larval tubule	356 ± 4	4 of 4	0.50	Down
Larval hindgut	373 ± 15	4 of 4	0.57	Down
Larval fat body	287 ± 20	4 of 4	0.40	Down
Larval trachea	710 ± 73	4 of 4	1.09	None
Larval carcass	445 ± 25	4 of 4	0.68	Down
S2 cells (growing)	683 ± 30	4 of 4	1.04	None
Whole fly	654 ± 15	4 of 4

Looking for FBgn0261790. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720