FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0261792 through 18771 annotations produced 1 hits

():

Annotation Number : CG5454
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038667
Gbrowse : chr3R:14808677-14809370 (-) // 100.0 //
Probeset : 1639046_at
Accessions : protein= NP_650767;, nucleotide= NM_142510;
Pathway : via spliceosome // inferred from mutant phenotype /// 0007052 // mitotic spindle organization // inferred from mutant p
Interpro : 0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus //
FlyMine data for FBgn0038667.
BDGP gene expression has embryonic in situ data for CG5454: 13 pix of staining in 18 body parts.
BioGrid reports that CG5454 interacts with CG9927 .
VDRC has 3 RNAi stocks for FBgn0038667 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	136 ± 4	4 of 4	0.80	None
Head	150 ± 11	4 of 4	0.90	None
Eye	99 ± 7	4 of 4	0.56	Down
Thoracicoabdominal ganglion	127 ± 7	4 of 4	0.70	Down
Salivary gland	260 ± 3	4 of 4	1.48	Up
Crop	249 ± 14	4 of 4	1.40	Up
Midgut	167 ± 0	4 of 4	0.90	None
Tubule	81 ± 1	4 of 4	0.50	Down
Hindgut	160 ± 7	4 of 4	0.90	None
Heart	108 ± 4	4 of 4	0.61	Down
Fat body	158 ± 9	4 of 4	0.90	None
Ovary	401 ± 9	4 of 4	2.30	Up
Testis	183 ± 2	4 of 4	1.00	None
Male accessory glands	208 ± 8	4 of 4	1.20	None
Virgin spermatheca	221 ± 4	4 of 4	1.25	Up
Mated spermatheca	192 ± 5	4 of 4	1.09	None
Adult carcass	115 ± 3	4 of 4	0.70	Down
Larval CNS	429 ± 37	4 of 4	2.43	Up
Larval Salivary gland	264 ± 8	4 of 4	1.50	Up
Larval midgut	127 ± 4	4 of 4	0.73	Down
Larval tubule	272 ± 6	4 of 4	1.50	Up
Larval hindgut	187 ± 14	4 of 4	1.06	None
Larval fat body	290 ± 13	4 of 4	1.60	Up
Larval trachea	208 ± 8	4 of 4	1.18	None
Larval carcass	174 ± 9	4 of 4	0.99	None
S2 cells (growing)	402 ± 3	4 of 4	2.28	Up
Whole fly	176 ± 10	4 of 4

Looking for FBgn0261792. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720