FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0261794 through 18771 annotations produced 1 hits

():

Annotation Number : CG5594
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0025698
Gbrowse : chr2R:19795650-19812589 (+) // 100.0 //
Probeset : 1623037_a_at
Accessions : protein= NP_571976; /// NP_726377; /// NP_726378; /// NP_726379;, nucleotide= NM_131901; /// NM_166630; /// NM_166631; /// NM_166632;
Pathway : 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electron
Interpro : 0005215 // transporter activity // inferred from electronic annotation /// 0015377 // cation:chloride symporter activity
FlyMine data for FBgn0025698.
BDGP gene expression has embryonic in situ data for BEST:CK01510: 35 pix of staining in 12 body parts.
Homophila reports that CG5594 is a close match (1e-52) to human gene NCCT;SLC12A3;TSC (NP_000330), a gene associated with Gitelman syndrome, 263800 (3).
VDRC has 2 RNAi stocks for FBgn0025698 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2266 ± 36	4 of 4	11.30	Up
Head	866 ± 43	4 of 4	4.30	Up
Eye	839 ± 66	4 of 4	4.18	Up
Thoracicoabdominal ganglion	2825 ± 57	4 of 4	14.00	Up
Salivary gland	392 ± 24	4 of 4	1.95	Up
Crop	179 ± 8	4 of 4	0.90	None
Midgut	441 ± 13	4 of 4	2.20	Up
Tubule	35 ± 3	3 of 4	0.20	Down
Hindgut	142 ± 7	4 of 4	0.70	Down
Heart	339 ± 17	4 of 4	1.69	Up
Fat body	60 ± 11	4 of 4	0.30	Down
Ovary	132 ± 5	4 of 4	0.70	Down
Testis	53 ± 1	4 of 4	0.30	Down
Male accessory glands	124 ± 7	4 of 4	0.60	Down
Virgin spermatheca	121 ± 25	4 of 4	0.60	Down
Mated spermatheca	144 ± 15	4 of 4	0.72	Down
Adult carcass	156 ± 5	4 of 4	0.80	Down
Larval CNS	908 ± 90	4 of 4	4.52	Up
Larval Salivary gland	9 ± 2	0 of 4	0.05	Down
Larval midgut	870 ± 36	4 of 4	4.33	Up
Larval tubule	171 ± 8	4 of 4	0.90	None
Larval hindgut	503 ± 9	4 of 4	2.51	Up
Larval fat body	287 ± 19	4 of 4	1.40	Up
Larval trachea	27 ± 18	3 of 4	0.13	Down
Larval carcass	364 ± 37	4 of 4	1.81	Up
S2 cells (growing)	629 ± 6	4 of 4	3.13	Up
Whole fly	201 ± 11	4 of 4

Looking for FBgn0261794. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720