FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0261797 through 18771 annotations produced 3 hits

():

Annotation Number : CG7507
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0010349
Gbrowse : chr3L:4812760-4825733 (-) // 100.0 //
Probeset : 1632408_at
Accessions : protein= NP_523929; /// NP_729034;, nucleotide= NM_079205; /// NM_168103;
Pathway : 0000776 // kinetochore // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737
Interpro : "0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from ele
FlyMine data for FBgn0010349.
Homophila reports that CG7507 is a close match (2e-152) to human gene CILD7;DNAH11;DNAHBL;DNAHC11;KTGS3 (NP_003768), a gene associated with Ciliary dyskinesia, primary 7, 611884 (3);Kartagener syndrome, 612273 (3).
BioGrid reports that CG7507 interacts with CG3510 CG9206 CG9206 CG9206 CG9206 CG7765 CG9206 CG9206 .
VDRC has 2 RNAi stocks for FBgn0010349 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1 ± 0	0 of 4	1.90	None
Head	0 ± 0	0 of 4	1.00	None
Eye	1 ± 1	0 of 4	2.17	None
Thoracicoabdominal ganglion	0 ± 0	0 of 4	1.00	None
Salivary gland	1 ± 0	0 of 4	2.20	None
Crop	1 ± 0	0 of 4	1.30	None
Midgut	1 ± 0	0 of 4	1.50	None
Tubule	1 ± 0	0 of 4	1.60	None
Hindgut	0 ± 0	0 of 4	0.70	None
Heart	1 ± 0	0 of 4	2.26	None
Fat body	3 ± 2	0 of 4	4.06	None
Ovary	1 ± 0	0 of 4	1.20	None
Testis	0 ± 0	0 of 4	0.30	Down
Male accessory glands	1 ± 0	0 of 4	1.70	None
Virgin spermatheca	1 ± 0	0 of 4	2.06	None
Mated spermatheca	1 ± 0	0 of 4	1.60	None
Adult carcass	2 ± 0	0 of 4	2.60	None
Larval CNS	0 ± 0	0 of 4	0.83	None
Larval Salivary gland	1 ± 0	0 of 4	1.57	Up
Larval midgut	0 ± 0	0 of 4	1.03	None
Larval tubule	1 ± 0	0 of 4	1.30	None
Larval hindgut	0 ± 0	0 of 4	0.91	None
Larval fat body	0 ± 0	0 of 4	1.00	None
Larval trachea	2 ± 1	0 of 4	2.94	None
Larval carcass	1 ± 0	0 of 4	1.14	None
S2 cells (growing)	2 ± 1	0 of 4	2.94	None
Whole fly	0 ± 0	0 of 4

():

Annotation Number : CG7507
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0010349
Gbrowse : chr3L:4807367-4825733 (-) // 100.0 //
Probeset : 1623383_at
Accessions : protein= NP_523929; /// NP_729034;, nucleotide= NM_079205; /// NM_168103;
Pathway : 0000776 // kinetochore // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737
Interpro : "0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from ele
FlyMine data for FBgn0010349.
Homophila reports that CG7507 is a close match (2e-152) to human gene CILD7;DNAH11;DNAHBL;DNAHC11;KTGS3 (NP_003768), a gene associated with Ciliary dyskinesia, primary 7, 611884 (3);Kartagener syndrome, 612273 (3).
BioGrid reports that CG7507 interacts with CG3510 CG9206 CG9206 CG9206 CG9206 CG7765 CG9206 CG9206 .
VDRC has 2 RNAi stocks for FBgn0010349 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	622 ± 14	4 of 4	2.40	Up
Head	232 ± 8	4 of 4	0.90	None
Eye	307 ± 26	4 of 4	1.19	None
Thoracicoabdominal ganglion	763 ± 38	4 of 4	2.90	Up
Salivary gland	445 ± 24	4 of 4	1.72	Up
Crop	259 ± 6	4 of 4	1.00	None
Midgut	289 ± 3	4 of 4	1.10	None
Tubule	515 ± 7	4 of 4	2.00	Up
Hindgut	275 ± 1	4 of 4	1.10	None
Heart	257 ± 13	4 of 4	0.99	None
Fat body	166 ± 12	4 of 4	0.64	Down
Ovary	566 ± 19	4 of 4	2.20	Up
Testis	146 ± 7	4 of 4	0.60	Down
Male accessory glands	235 ± 5	4 of 4	0.90	None
Virgin spermatheca	206 ± 9	4 of 4	0.80	Down
Mated spermatheca	280 ± 18	4 of 4	1.08	None
Adult carcass	191 ± 8	4 of 4	0.70	Down
Larval CNS	616 ± 13	4 of 4	2.38	Up
Larval Salivary gland	786 ± 34	4 of 4	3.04	Up
Larval midgut	462 ± 13	4 of 4	1.79	Up
Larval tubule	336 ± 14	4 of 4	1.30	Up
Larval hindgut	512 ± 6	4 of 4	1.98	Up
Larval fat body	177 ± 5	4 of 4	0.70	Down
Larval trachea	716 ± 40	4 of 4	2.77	Up
Larval carcass	350 ± 20	4 of 4	1.35	Up
S2 cells (growing)	394 ± 14	4 of 4	1.52	Up
Whole fly	259 ± 10	4 of 4

():

Annotation Number : CG7507
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0010349
Gbrowse : chr3L:4812760-4825733 (-) // 100.0 //
Probeset : 1637137_a_at
Accessions : protein= NP_523929; /// NP_729034;, nucleotide= NM_079205; /// NM_168103;
Pathway : 0000776 // kinetochore // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737
Interpro : "0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from ele
FlyMine data for FBgn0010349.
Homophila reports that CG7507 is a close match (2e-152) to human gene CILD7;DNAH11;DNAHBL;DNAHC11;KTGS3 (NP_003768), a gene associated with Ciliary dyskinesia, primary 7, 611884 (3);Kartagener syndrome, 612273 (3).
BioGrid reports that CG7507 interacts with CG3510 CG9206 CG9206 CG9206 CG9206 CG7765 CG9206 CG9206 .
VDRC has 2 RNAi stocks for FBgn0010349 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	5 ± 1	0 of 4	3.60	None
Head	2 ± 1	0 of 4	1.70	None
Eye	0 ± 0	0 of 4	0.51	None
Thoracicoabdominal ganglion	1 ± 0	0 of 4	1.20	None
Salivary gland	2 ± 0	0 of 4	1.56	None
Crop	8 ± 0	1 of 4	5.70	Up
Midgut	1 ± 0	0 of 4	1.00	None
Tubule	1 ± 0	0 of 4	0.80	None
Hindgut	7 ± 2	1 of 4	5.30	None
Heart	1 ± 0	0 of 4	1.17	None
Fat body	2 ± 2	0 of 4	1.53	None
Ovary	2 ± 0	0 of 4	1.40	None
Testis	0 ± 0	0 of 4	0.50	None
Male accessory glands	3 ± 1	0 of 4	2.60	None
Virgin spermatheca	2 ± 1	0 of 4	1.71	None
Mated spermatheca	2 ± 1	0 of 4	1.83	None
Adult carcass	3 ± 1	0 of 4	2.20	None
Larval CNS	0 ± 0	0 of 4	0.47	None
Larval Salivary gland	5 ± 1	0 of 4	3.73	None
Larval midgut	3 ± 1	0 of 4	2.25	None
Larval tubule	4 ± 1	0 of 4	3.30	None
Larval hindgut	3 ± 0	0 of 4	2.24	None
Larval fat body	8 ± 2	0 of 4	5.90	None
Larval trachea	0 ± 0	0 of 4	0.56	None
Larval carcass	6 ± 1	0 of 4	4.66	Up
S2 cells (growing)	8 ± 3	3 of 4	6.07	None
Whole fly	1 ± 0	0 of 4

Looking for FBgn0261797. 3 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720