FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0261885 through 18771 annotations produced 1 hits

():

Annotation Number : CG7467
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0003013
Gbrowse : chr3R:13513539-13544059 (-) // 100.0 //
Probeset : 1633792_a_at
Accessions : protein= NP_001163639; /// NP_524392; /// NP_732263; /// NP_996228;, nucleotide= NM_001170168; /// NM_079668; /// NM_169775; /// NM_206506;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay ///
Interpro : 0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /
FlyMine data for FBgn0003013.
BioGrid reports that CG7467 interacts with CG8291 CG1028 CG5942 CG5942 CG5942 CG5942 CG5942 CG5942 CG9885 CG6502 CG6502 CG3340 CG3340 CG3340 CG1689 CG18740 CG18740 CG1028 CG3938 CG4654 CG6376 CG32443 CG9375 CG1064 CG9383 CG6348 CG6348 CG18085 CG2621 CG2621 CG6889 CG6889 CG7958 .
VDRC has 1 RNAi stocks for FBgn0003013 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	367 ± 11	4 of 4	5.20	Up
Head	136 ± 5	4 of 4	1.90	Up
Eye	127 ± 9	4 of 4	1.81	Up
Thoracicoabdominal ganglion	329 ± 12	4 of 4	4.70	Up
Salivary gland	116 ± 11	4 of 4	1.64	Up
Crop	194 ± 7	4 of 4	2.70	Up
Midgut	83 ± 3	4 of 4	1.20	Up
Tubule	60 ± 1	4 of 4	0.90	Down
Hindgut	124 ± 5	4 of 4	1.80	Up
Heart	78 ± 5	4 of 4	1.11	None
Fat body	105 ± 7	4 of 4	1.49	Up
Ovary	111 ± 3	4 of 4	1.60	Up
Testis	23 ± 0	4 of 4	0.30	Down
Male accessory glands	204 ± 15	4 of 4	2.90	Up
Virgin spermatheca	172 ± 12	4 of 4	2.44	Up
Mated spermatheca	187 ± 22	4 of 4	2.66	Up
Adult carcass	99 ± 4	4 of 4	1.40	Up
Larval CNS	622 ± 38	4 of 4	8.82	Up
Larval Salivary gland	230 ± 11	4 of 4	3.26	Up
Larval midgut	81 ± 6	4 of 4	1.16	None
Larval tubule	103 ± 3	4 of 4	1.50	Up
Larval hindgut	133 ± 6	4 of 4	1.89	Up
Larval fat body	100 ± 10	4 of 4	1.40	None
Larval trachea	208 ± 16	4 of 4	2.95	Up
Larval carcass	166 ± 7	4 of 4	2.35	Up
S2 cells (growing)	180 ± 7	4 of 4	2.56	Up
Whole fly	70 ± 3	4 of 4

Looking for FBgn0261885. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720