FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0261933 through 18771 annotations produced 1 hits

():

Annotation Number : CG10753
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0016940
Gbrowse : chr3L:12726463-12727708 (-) // 99.32 //
Probeset : 1628088_at
Accessions : protein= NP_524774;, nucleotide= NM_080035;
Pathway : via spliceosome // inferred from sequence or structural similarity /// 0006397 // mRNA processing // inferred from elec
Interpro : 0005634 // nucleus // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from elec
FlyMine data for FBgn0016940.
BDGP gene expression has embryonic in situ data for snRNP69D: 4 pix of staining in 1 body parts.
BioGrid reports that CG10753 interacts with CG1745 CG4116 .
VDRC has 2 RNAi stocks for FBgn0016940 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	90 ± 6	4 of 4	0.30	Down
Head	97 ± 3	4 of 4	0.30	Down
Eye	64 ± 3	4 of 4	0.20	Down
Thoracicoabdominal ganglion	91 ± 1	4 of 4	0.30	Down
Salivary gland	68 ± 5	4 of 4	0.21	Down
Crop	102 ± 5	4 of 4	0.30	Down
Midgut	137 ± 3	4 of 4	0.40	Down
Tubule	96 ± 9	4 of 4	0.30	Down
Hindgut	93 ± 5	4 of 4	0.30	Down
Heart	74 ± 3	4 of 4	0.23	Down
Fat body	103 ± 15	4 of 4	0.32	Down
Ovary	576 ± 5	4 of 4	1.80	Up
Testis	286 ± 3	4 of 4	0.90	Down
Male accessory glands	137 ± 3	4 of 4	0.40	Down
Virgin spermatheca	98 ± 3	4 of 4	0.30	Down
Mated spermatheca	106 ± 7	4 of 4	0.32	Down
Adult carcass	82 ± 6	4 of 4	0.20	Down
Larval CNS	569 ± 28	4 of 4	1.73	Up
Larval Salivary gland	193 ± 2	4 of 4	0.59	Down
Larval midgut	90 ± 1	4 of 4	0.28	Down
Larval tubule	103 ± 5	4 of 4	0.30	Down
Larval hindgut	127 ± 3	4 of 4	0.39	Down
Larval fat body	120 ± 9	4 of 4	0.40	Down
Larval trachea	306 ± 48	4 of 4	0.93	None
Larval carcass	159 ± 8	4 of 4	0.48	Down
S2 cells (growing)	352 ± 8	4 of 4	1.07	None
Whole fly	329 ± 11	4 of 4

Looking for FBgn0261933. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720