FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0261934 through 18771 annotations produced 2 hits

():

Annotation Number : CG32393
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052393
Gbrowse : chr3L:6733404-6736249 (-) // 100.0 //
Probeset : 1640017_at
Accessions : protein= NP_648055; /// NP_996007;, nucleotide= NM_139798; /// NM_206285;
FlyMine data for FBgn0052393.
BDGP gene expression has embryonic in situ data for CG32393: 4 pix of staining in 1 body parts.
VDRC has 3 RNAi stocks for FBgn0052393 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	4 ± 0	0 of 4	0.70	None
Head	2 ± 0	0 of 4	0.30	None
Eye	1 ± 0	0 of 4	0.20	None
Thoracicoabdominal ganglion	1 ± 0	0 of 4	0.20	None
Salivary gland	3 ± 0	0 of 4	0.51	None
Crop	3 ± 1	0 of 4	0.50	None
Midgut	3 ± 1	0 of 4	0.50	None
Tubule	1 ± 0	0 of 4	0.30	Down
Hindgut	3 ± 0	0 of 4	0.60	None
Heart	7 ± 0	0 of 4	1.17	None
Fat body	7 ± 0	0 of 4	1.04	None
Ovary	12 ± 0	0 of 4	1.90	None
Testis	8 ± 0	0 of 4	1.20	None
Male accessory glands	2 ± 0	0 of 4	0.30	None
Virgin spermatheca	0 ± 0	0 of 4	0.13	None
Mated spermatheca	2 ± 1	0 of 4	0.37	None
Adult carcass	6 ± 2	0 of 4	0.90	None
Larval CNS	2 ± 1	0 of 4	0.40	None
Larval Salivary gland	0 ± 0	0 of 4	0.13	None
Larval midgut	2 ± 1	0 of 4	0.40	None
Larval tubule	3 ± 1	0 of 4	0.50	None
Larval hindgut	3 ± 1	0 of 4	0.44	None
Larval fat body	4 ± 1	0 of 4	0.70	None
Larval trachea	4 ± 2	0 of 4	0.63	None
Larval carcass	1 ± 0	0 of 4	0.27	None
S2 cells (growing)	3 ± 0	0 of 4	0.54	None
Whole fly	6 ± 2	0 of 4

():

Annotation Number : CG32394
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052394
Gbrowse : chr3L:6723261-6732746 (-) // 99.95 //
Probeset : 1636177_at
Accessions : protein= NP_729188;, nucleotide= NM_168179;
FlyMine data for FBgn0052394.
VDRC has 3 RNAi stocks for FBgn0052394 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	25 ± 0	4 of 4	1.40	None
Head	9 ± 1	0 of 4	0.50	Down
Eye	4 ± 1	0 of 4	0.24	Down
Thoracicoabdominal ganglion	10 ± 3	3 of 4	0.60	None
Salivary gland	2 ± 0	0 of 4	0.15	Down
Crop	10 ± 0	0 of 4	0.60	Down
Midgut	2 ± 0	0 of 4	0.10	Down
Tubule	2 ± 0	0 of 4	0.10	Down
Hindgut	3 ± 1	0 of 4	0.20	Down
Heart	6 ± 2	0 of 4	0.33	Down
Fat body	7 ± 4	0 of 4	0.39	Down
Ovary	30 ± 2	4 of 4	1.70	Up
Testis	119 ± 7	4 of 4	6.50	Up
Male accessory glands	3 ± 1	0 of 4	0.20	Down
Virgin spermatheca	2 ± 0	0 of 4	0.11	Down
Mated spermatheca	0 ± 0	0 of 4	0.04	Down
Adult carcass	12 ± 1	0 of 4	0.70	None
Larval CNS	15 ± 1	4 of 4	0.83	None
Larval Salivary gland	10 ± 4	0 of 4	0.55	None
Larval midgut	3 ± 1	0 of 4	0.18	Down
Larval tubule	7 ± 1	1 of 4	0.40	Down
Larval hindgut	4 ± 1	0 of 4	0.26	Down
Larval fat body	10 ± 7	1 of 4	0.60	None
Larval trachea	6 ± 4	0 of 4	0.33	Down
Larval carcass	6 ± 2	0 of 4	0.34	Down
S2 cells (growing)	26 ± 1	4 of 4	1.44	Up
Whole fly	18 ± 2	2 of 4

Looking for FBgn0261934. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720