FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0261953 through 18771 annotations produced 1 hits

():

Annotation Number : CG7807
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0023417
Gbrowse : chr3L:21591957-21606453 (+) // 100.0 //
Probeset : 1631372_a_at
Accessions : protein= NP_649336; /// NP_730664;, nucleotide= NM_141079; /// NM_168927;
Pathway : DNA-dependent // inferred from electronic annotation"
Interpro : 0005634 // nucleus // inferred from electronic annotation
FlyMine data for FBgn0023417.
BDGP gene expression has embryonic in situ data for AP-2: 32 pix of staining in 7 body parts.
Homophila reports that CG7807 is a close match (4e-73) to human gene TFAP2B;CHAR (NP_003212), a gene associated with Char syndrome, 169100 (3).
BioGrid reports that CG7807 interacts with CG3936 .
VDRC has 3 RNAi stocks for FBgn0023417 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	203 ± 3	4 of 4	25.20	Up
Head	41 ± 3	4 of 4	5.10	Up
Eye	6 ± 2	1 of 4	0.77	None
Thoracicoabdominal ganglion	20 ± 1	4 of 4	2.50	Up
Salivary gland	1 ± 0	0 of 4	0.24	Down
Crop	8 ± 1	0 of 4	1.00	None
Midgut	1 ± 0	0 of 4	0.10	Down
Tubule	2 ± 0	0 of 4	0.40	Down
Hindgut	1 ± 0	0 of 4	0.10	Down
Heart	0 ± 0	0 of 4	0.07	Down
Fat body	3 ± 2	0 of 4	0.44	None
Ovary	0 ± 0	0 of 4	0.10	Down
Testis	3 ± 1	0 of 4	0.40	None
Male accessory glands	16 ± 2	1 of 4	2.00	None
Virgin spermatheca	0 ± 0	0 of 4	0.11	Down
Mated spermatheca	2 ± 0	0 of 4	0.26	Down
Adult carcass	4 ± 1	0 of 4	0.60	None
Larval CNS	201 ± 21	4 of 4	24.90	Up
Larval Salivary gland	1 ± 1	0 of 4	0.21	Down
Larval midgut	2 ± 1	0 of 4	0.26	Down
Larval tubule	1 ± 0	0 of 4	0.20	Down
Larval hindgut	1 ± 0	0 of 4	0.20	Down
Larval fat body	4 ± 1	0 of 4	0.50	None
Larval trachea	1 ± 2	0 of 4	0.20	Down
Larval carcass	18 ± 4	0 of 4	2.28	None
S2 cells (growing)	0 ± 0	0 of 4	0.07	Down
Whole fly	8 ± 1	0 of 4

Looking for FBgn0261953. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720