FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0261984 through 18771 annotations produced 2 hits

():

Annotation Number : S.C3R002104
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038736
Gbrowse : chr3R:15685086-15686672 (-) // 100.0 //
Probeset : 1640155_at
Accessions : protein= NP_001097839; /// NP_001097840;, nucleotide= NM_001104369; /// NM_001104370;
Interpro : "0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinas
FlyMine data for FBgn0038736.
VDRC has 2 RNAi stocks for FBgn0038736 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	14 ± 3	4 of 4	1.70	None
Head	10 ± 2	1 of 4	1.20	None
Eye	6 ± 1	1 of 4	0.80	None
Thoracicoabdominal ganglion	7 ± 2	1 of 4	0.80	None
Salivary gland	6 ± 2	0 of 4	0.71	None
Crop	7 ± 1	1 of 4	0.80	None
Midgut	10 ± 1	1 of 4	1.20	None
Tubule	4 ± 1	0 of 4	0.50	Down
Hindgut	9 ± 1	0 of 4	1.10	None
Heart	6 ± 1	1 of 4	0.75	None
Fat body	13 ± 3	2 of 4	1.55	None
Ovary	13 ± 2	3 of 4	1.50	None
Testis	1 ± 0	0 of 4	0.20	Down
Male accessory glands	25 ± 3	3 of 4	2.90	Up
Virgin spermatheca	5 ± 1	0 of 4	0.66	None
Mated spermatheca	6 ± 2	0 of 4	0.77	None
Adult carcass	6 ± 2	0 of 4	0.80	None
Larval CNS	6 ± 1	3 of 4	0.76	None
Larval Salivary gland	7 ± 3	0 of 4	0.90	None
Larval midgut	5 ± 1	0 of 4	0.65	None
Larval tubule	20 ± 2	4 of 4	2.40	Up
Larval hindgut	4 ± 1	0 of 4	0.46	Down
Larval fat body	11 ± 2	1 of 4	1.30	None
Larval trachea	5 ± 2	0 of 4	0.63	None
Larval carcass	13 ± 1	0 of 4	1.51	None
S2 cells (growing)	57 ± 6	4 of 4	6.66	Up
Whole fly	8 ± 1	1 of 4

():

Annotation Number : CG4583
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038736
Gbrowse : chr3R:15680161-15683516 (-) // 100.0 //
Probeset : 1641293_at
Accessions : protein= NP_001097839; /// NP_001097840;, nucleotide= NM_001104369; /// NM_001104370;
Interpro : "0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinas
FlyMine data for FBgn0038736.
BioGrid reports that CG4583 interacts with CG8776 CG4622 CG8310 .
VDRC has 2 RNAi stocks for FBgn0038736 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	94 ± 4	4 of 4	1.60	Up
Head	65 ± 6	4 of 4	1.10	None
Eye	38 ± 2	4 of 4	0.66	Down
Thoracicoabdominal ganglion	80 ± 6	4 of 4	1.40	Up
Salivary gland	28 ± 4	0 of 4	0.49	Down
Crop	44 ± 3	4 of 4	0.80	None
Midgut	84 ± 4	4 of 4	1.40	Up
Tubule	53 ± 2	4 of 4	0.90	None
Hindgut	67 ± 2	4 of 4	1.10	None
Heart	72 ± 7	4 of 4	1.24	None
Fat body	60 ± 9	4 of 4	1.04	None
Ovary	100 ± 4	4 of 4	1.70	Up
Testis	35 ± 2	4 of 4	0.60	Down
Male accessory glands	154 ± 5	4 of 4	2.60	Up
Virgin spermatheca	74 ± 3	4 of 4	1.28	None
Mated spermatheca	69 ± 7	4 of 4	1.18	None
Adult carcass	50 ± 5	4 of 4	0.90	None
Larval CNS	52 ± 8	4 of 4	0.90	None
Larval Salivary gland	100 ± 4	4 of 4	1.72	Up
Larval midgut	63 ± 4	4 of 4	1.09	None
Larval tubule	161 ± 7	4 of 4	2.80	Up
Larval hindgut	66 ± 3	4 of 4	1.15	None
Larval fat body	47 ± 1	4 of 4	0.80	None
Larval trachea	41 ± 5	4 of 4	0.70	Down
Larval carcass	38 ± 4	4 of 4	0.67	Down
S2 cells (growing)	247 ± 1	4 of 4	4.24	Up
Whole fly	58 ± 5	4 of 4

Looking for FBgn0261984. 2 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720