FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0261999 through 18771 annotations produced 2 hits

():

Annotation Number : CG12455
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0028859
Gbrowse : chr2L:16235619-16239923 (+) // 99.26 //
Probeset : 1633366_at
Accessions : protein= NP_609779; /// NP_723955;, nucleotide= NM_135935; /// NM_165149;
Pathway : 0016020 // membrane // inferred from electronic annotation
FlyMine data for FBgn0028859.
Homophila reports that CG12455 is a close match (5e-132) to human gene CACNA2D4;RCD4 (NP_758952), a gene associated with Retinal cone dystrophy 4, 610478 (3).
VDRC has 1 RNAi stocks for FBgn0028859 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	54 ± 5	4 of 4	5.80	Up
Head	17 ± 3	3 of 4	1.90	None
Eye	30 ± 2	4 of 4	3.31	Up
Thoracicoabdominal ganglion	49 ± 5	4 of 4	5.30	Up
Salivary gland	2 ± 0	0 of 4	0.27	Down
Crop	55 ± 3	4 of 4	5.90	Up
Midgut	4 ± 0	0 of 4	0.50	Down
Tubule	1 ± 0	0 of 4	0.10	Down
Hindgut	15 ± 1	4 of 4	1.60	Up
Heart	26 ± 2	4 of 4	2.84	Up
Fat body	2 ± 3	0 of 4	0.25	Down
Ovary	1 ± 0	0 of 4	0.10	Down
Testis	7 ± 1	1 of 4	0.80	None
Male accessory glands	9 ± 2	0 of 4	1.00	None
Virgin spermatheca	0 ± 0	0 of 4	0.08	Down
Mated spermatheca	2 ± 0	0 of 4	0.27	Down
Adult carcass	24 ± 1	3 of 4	2.70	Up
Larval CNS	24 ± 4	4 of 4	2.65	Up
Larval Salivary gland	0 ± 0	0 of 4	0.09	Down
Larval midgut	7 ± 1	0 of 4	0.79	None
Larval tubule	2 ± 0	0 of 4	0.20	Down
Larval hindgut	18 ± 1	4 of 4	1.94	Up
Larval fat body	2 ± 1	1 of 4	0.30	Down
Larval trachea	5 ± 3	0 of 4	0.58	None
Larval carcass	54 ± 2	4 of 4	5.84	Up
S2 cells (growing)	1 ± 0	0 of 4	0.14	Down
Whole fly	9 ± 0	3 of 4

():

Annotation Number : CG12455
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0028859
Gbrowse : chr2L:16235619-16239923 (+) // 99.26 //
Probeset : 1624056_a_at
Accessions : protein= NP_609779; /// NP_723955;, nucleotide= NM_135935; /// NM_165149;
Pathway : 0016020 // membrane // inferred from electronic annotation
FlyMine data for FBgn0028859.
Homophila reports that CG12455 is a close match (5e-132) to human gene CACNA2D4;RCD4 (NP_758952), a gene associated with Retinal cone dystrophy 4, 610478 (3).
VDRC has 1 RNAi stocks for FBgn0028859 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	58 ± 4	4 of 4	4.00	Up
Head	23 ± 2	4 of 4	1.60	Up
Eye	48 ± 6	4 of 4	3.33	Up
Thoracicoabdominal ganglion	59 ± 11	4 of 4	4.10	Up
Salivary gland	9 ± 2	0 of 4	0.68	None
Crop	61 ± 2	4 of 4	4.20	Up
Midgut	8 ± 0	1 of 4	0.60	Down
Tubule	6 ± 0	0 of 4	0.40	Down
Hindgut	19 ± 2	4 of 4	1.30	None
Heart	40 ± 4	4 of 4	2.78	Up
Fat body	10 ± 3	0 of 4	0.70	None
Ovary	3 ± 0	0 of 4	0.20	Down
Testis	7 ± 0	2 of 4	0.50	Down
Male accessory glands	10 ± 4	1 of 4	0.70	None
Virgin spermatheca	6 ± 1	0 of 4	0.41	Down
Mated spermatheca	4 ± 1	0 of 4	0.33	Down
Adult carcass	34 ± 5	4 of 4	2.30	Up
Larval CNS	23 ± 3	4 of 4	1.62	Up
Larval Salivary gland	5 ± 1	0 of 4	0.35	Down
Larval midgut	9 ± 0	2 of 4	0.61	Down
Larval tubule	8 ± 1	4 of 4	0.60	Down
Larval hindgut	20 ± 3	4 of 4	1.42	None
Larval fat body	10 ± 1	3 of 4	0.70	None
Larval trachea	8 ± 1	2 of 4	0.56	Down
Larval carcass	47 ± 6	4 of 4	3.23	Up
S2 cells (growing)	1 ± 0	0 of 4	0.12	Down
Whole fly	14 ± 1	4 of 4

Looking for FBgn0261999. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720