FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0262026 through 18771 annotations produced 1 hits

(CG8446):

Annotation Number : CG8446
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034089
Gbrowse : chr2R:12083895-12086884 (+) // 100.0 //
Probeset : 1635120_at
Accessions : protein= NP_001137675; /// NP_001137676; /// NP_611097;, nucleotide= NM_001144203; /// NM_001144204; /// NM_137253;
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0017118 // lipoyltransferase activity // inferr
FlyMine data for FBgn0034089.
BDGP gene expression has embryonic in situ data for CG8446: 14 pix of staining in 9 body parts.
BioGrid reports that CG8446 interacts with CG8495 CG9949 .
VDRC has 3 RNAi stocks for FBgn0034089 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	532 ± 15	4 of 4	0.90	None
Head	883 ± 20	4 of 4	1.60	Up
Eye	493 ± 46	4 of 4	0.88	None
Thoracicoabdominal ganglion	536 ± 4	4 of 4	1.00	None
Salivary gland	942 ± 42	4 of 4	1.68	Up
Crop	750 ± 19	4 of 4	1.30	Up
Midgut	742 ± 20	4 of 4	1.30	Up
Tubule	2552 ± 113	4 of 4	4.50	Up
Hindgut	977 ± 27	4 of 4	1.70	Up
Heart	1288 ± 29	4 of 4	2.30	Up
Fat body	2039 ± 228	4 of 4	3.63	Up
Ovary	277 ± 7	4 of 4	0.50	Down
Testis	358 ± 8	4 of 4	0.60	Down
Male accessory glands	417 ± 14	4 of 4	0.70	None
Virgin spermatheca	2072 ± 60	4 of 4	3.69	Up
Mated spermatheca	1718 ± 132	4 of 4	3.06	Up
Adult carcass	1362 ± 33	4 of 4	2.40	Up
Larval CNS	222 ± 21	4 of 4	0.40	Down
Larval Salivary gland	686 ± 70	4 of 4	1.22	None
Larval midgut	633 ± 44	4 of 4	1.13	None
Larval tubule	2075 ± 21	4 of 4	3.70	Up
Larval hindgut	810 ± 69	4 of 4	1.44	Up
Larval fat body	1008 ± 169	4 of 4	1.80	None
Larval trachea	462 ± 64	4 of 4	0.82	None
Larval carcass	977 ± 64	4 of 4	1.74	Up
S2 cells (growing)	251 ± 8	4 of 4	0.45	Down
Whole fly	561 ± 53	4 of 4

Looking for FBgn0262026. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720