FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0262111 through 18771 annotations produced 2 hits

():

Annotation Number : CG5424
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0000630
Gbrowse : chrX:17146177-17174997 (+) // 100.0 //
Probeset : 1625621_s_at
Accessions : protein= NP_001036284; /// NP_523384; /// NP_728070; /// NP_788918; /// NP_788919; /// NP_788920;, nucleotide= NM_001042819; /// NM_078660; /// NM_167563; /// NM_176745; /// NM_176746; /// NM_176747;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0000630.
Homophila reports that CG5424 is a close match (3e-11) to human gene ANK1;SPH2 (NP_065209), a gene associated with Spherocytosis-2 (3).
BioGrid reports that CG5424 interacts with CG8573 CG17170 CG17170 CG17170 CG17170 .
VDRC has 4 RNAi stocks for FBgn0000630 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	4 ± 0	0 of 4	0.60	Down
Head	9 ± 1	0 of 4	1.40	None
Eye	19 ± 1	4 of 4	3.00	Up
Thoracicoabdominal ganglion	4 ± 1	0 of 4	0.70	None
Salivary gland	13 ± 1	0 of 4	2.05	Up
Crop	6 ± 1	0 of 4	1.00	None
Midgut	4 ± 1	0 of 4	0.70	None
Tubule	5 ± 0	0 of 4	0.80	Down
Hindgut	5 ± 0	0 of 4	0.80	None
Heart	2 ± 1	0 of 4	0.43	None
Fat body	11 ± 1	0 of 4	1.81	Up
Ovary	5 ± 1	0 of 4	0.80	None
Testis	0 ± 0	0 of 4	0.10	Down
Male accessory glands	5 ± 1	0 of 4	0.80	None
Virgin spermatheca	9 ± 1	0 of 4	1.44	None
Mated spermatheca	6 ± 1	0 of 4	0.95	None
Adult carcass	11 ± 3	0 of 4	1.70	None
Larval CNS	10 ± 1	0 of 4	1.56	Up
Larval Salivary gland	6 ± 1	0 of 4	1.07	None
Larval midgut	9 ± 1	0 of 4	1.39	None
Larval tubule	4 ± 1	0 of 4	0.60	None
Larval hindgut	10 ± 1	1 of 4	1.56	None
Larval fat body	7 ± 1	0 of 4	1.20	None
Larval trachea	6 ± 1	1 of 4	1.07	None
Larval carcass	11 ± 1	0 of 4	1.78	Up
S2 cells (growing)	3 ± 0	0 of 4	0.49	Down
Whole fly	6 ± 0	0 of 4

():

Annotation Number : CG12996
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030835
Gbrowse : chrX:17143543-17145135 (+) // 100.0 //
Probeset : 1634923_at
Accessions : protein= NP_573210;, nucleotide= NM_132982;
FlyMine data for FBgn0030835.
VDRC has 4 RNAi stocks for FBgn0030835 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1 ± 0	0 of 4	0.50	None
Head	7 ± 1	0 of 4	2.10	None
Eye	3 ± 1	0 of 4	1.12	None
Thoracicoabdominal ganglion	2 ± 1	0 of 4	0.60	None
Salivary gland	2 ± 0	0 of 4	0.61	None
Crop	4 ± 1	0 of 4	1.30	None
Midgut	2 ± 1	0 of 4	0.70	None
Tubule	3 ± 0	0 of 4	1.10	None
Hindgut	1 ± 0	0 of 4	0.30	None
Heart	2 ± 0	0 of 4	0.68	None
Fat body	8 ± 4	0 of 4	2.39	None
Ovary	1 ± 0	0 of 4	0.50	None
Testis	0 ± 0	0 of 4	0.30	None
Male accessory glands	1 ± 0	0 of 4	0.50	None
Virgin spermatheca	1 ± 0	0 of 4	0.52	None
Mated spermatheca	7 ± 2	0 of 4	2.18	None
Adult carcass	7 ± 2	0 of 4	2.10	None
Larval CNS	0 ± 0	0 of 4	0.28	None
Larval Salivary gland	5 ± 1	0 of 4	1.62	None
Larval midgut	2 ± 1	0 of 4	0.85	None
Larval tubule	3 ± 1	0 of 4	0.90	None
Larval hindgut	2 ± 1	0 of 4	0.80	None
Larval fat body	3 ± 2	0 of 4	1.00	None
Larval trachea	2 ± 1	0 of 4	0.80	None
Larval carcass	1 ± 0	0 of 4	0.54	None
S2 cells (growing)	1 ± 0	0 of 4	0.33	None
Whole fly	3 ± 1	0 of 4

Looking for FBgn0262111. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720