FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0262123 through 18771 annotations produced 3 hits

():

Annotation Number : CG40334
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085586
Gbrowse : chr2RHet:494220-495298 (+) // 100.0 //
Probeset : 1625736_at
Accessions : protein= NP_001104356; /// NP_001104357;, nucleotide= NM_001110886; /// NM_001110887;
FlyMine data for FBgn0085586.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	11 ± 0	4 of 4	0.60	None
Head	10 ± 1	4 of 4	0.60	None
Eye	3 ± 1	0 of 4	0.19	Down
Thoracicoabdominal ganglion	5 ± 0	2 of 4	0.30	Down
Salivary gland	9 ± 3	2 of 4	0.55	None
Crop	4 ± 1	1 of 4	0.30	Down
Midgut	6 ± 1	1 of 4	0.40	Down
Tubule	8 ± 0	2 of 4	0.50	Down
Hindgut	25 ± 1	4 of 4	1.50	Up
Heart	7 ± 0	4 of 4	0.42	Down
Fat body	13 ± 2	4 of 4	0.80	None
Ovary	12 ± 0	4 of 4	0.70	None
Testis	229 ± 6	4 of 4	13.50	Up
Male accessory glands	21 ± 3	4 of 4	1.30	None
Virgin spermatheca	6 ± 0	2 of 4	0.36	Down
Mated spermatheca	9 ± 2	3 of 4	0.55	Down
Adult carcass	8 ± 2	2 of 4	0.50	Down
Larval CNS	7 ± 1	4 of 4	0.42	Down
Larval Salivary gland	5 ± 1	1 of 4	0.34	Down
Larval midgut	5 ± 0	0 of 4	0.30	Down
Larval tubule	1 ± 0	0 of 4	0.10	Down
Larval hindgut	5 ± 1	3 of 4	0.31	Down
Larval fat body	26 ± 11	3 of 4	1.60	None
Larval trachea	12 ± 2	4 of 4	0.72	None
Larval carcass	4 ± 0	2 of 4	0.29	Down
S2 cells (growing)	9 ± 1	4 of 4	0.53	Down
Whole fly	17 ± 2	4 of 4

():

Annotation Number : CG40214
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085586
Gbrowse : chr2RHet:564495-570465 (+) // 100.0 //
Probeset : 1641348_at
Accessions : protein= NP_001104356; /// NP_001104357;, nucleotide= NM_001110886; /// NM_001110887;
FlyMine data for FBgn0085586.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	72 ± 2	4 of 4	4.70	Up
Head	13 ± 1	4 of 4	0.90	None
Eye	4 ± 1	2 of 4	0.29	Down
Thoracicoabdominal ganglion	109 ± 9	4 of 4	7.10	Up
Salivary gland	3 ± 1	0 of 4	0.24	Down
Crop	2 ± 1	0 of 4	0.10	Down
Midgut	0 ± 0	0 of 4	0.00	Down
Tubule	1 ± 0	0 of 4	0.10	Down
Hindgut	1 ± 0	0 of 4	0.10	Down
Heart	1 ± 0	0 of 4	0.08	Down
Fat body	1 ± 1	0 of 4	0.12	Down
Ovary	1 ± 0	0 of 4	0.10	Down
Testis	254 ± 5	4 of 4	16.50	Up
Male accessory glands	2 ± 2	1 of 4	0.20	Down
Virgin spermatheca	1 ± 0	0 of 4	0.08	Down
Mated spermatheca	1 ± 0	0 of 4	0.09	Down
Adult carcass	4 ± 1	0 of 4	0.30	Down
Larval CNS	63 ± 9	4 of 4	4.08	Up
Larval Salivary gland	2 ± 1	0 of 4	0.15	Down
Larval midgut	1 ± 0	0 of 4	0.10	Down
Larval tubule	0 ± 0	0 of 4	0.00	Down
Larval hindgut	1 ± 0	0 of 4	0.09	Down
Larval fat body	34 ± 19	3 of 4	2.20	None
Larval trachea	3 ± 2	1 of 4	0.21	Down
Larval carcass	1 ± 0	0 of 4	0.11	Down
S2 cells (growing)	3 ± 0	0 of 4	0.21	Down
Whole fly	15 ± 1	4 of 4

():

Annotation Number : CG40213
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085586
Gbrowse : chr2RHet:475752-476232 (+) // 100.0 // /// chr3LHet:514470-514949 (+) // 98.54 // /// chr3LHet:648771-649242 (+) // 95.0 // /// chr3RHet:1141148-1141627 (+) // 96.67 // /// chrU:6569559-6570039 (+) // 96.04 // /// chrU:8653979-8764635 (+) // 96.46 // /// chrUextra:25694997-25695476 (+) // 98.96 // /// chrUextra:7442893-7659674 (+) // 98.96 // /// chrUextra:1474872-1475339 (+) // 93.75 // /// chrUextra:8917871-9051548 (+) // 93.75 // /// chrUextra:939212-1421347 (+) // 94.38 // /// chr2L:21555579-21556050 (-) // 94.38 // /// chr2RHet:1387616-1388096 (-) // 97.5 // /// chr2RHet:1111139-1384106 (-) // 93.75 // /// chr3LHet:267273-267752 (-) // 99.17 // /// chr3LHet:543748-544228 (-) // 98.96 // /// chrU:8318087-8318566 (-) // 97.92 // /// chrU:8930681-8931152 (-) // 94.38 // /// chrUextra:27762894-27763347 (-) // 92.92 // /// chrUextra:7285043-7439233 (-) // 95.42 //
Probeset : 1626275_at
Accessions : protein= NP_001104356; /// NP_001104357;, nucleotide= NM_001110886; /// NM_001110887;
FlyMine data for FBgn0085586.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	5 ± 2	1 of 4	1.30	None
Head	11 ± 2	0 of 4	2.80	None
Eye	6 ± 0	0 of 4	1.68	Up
Thoracicoabdominal ganglion	5 ± 1	0 of 4	1.40	None
Salivary gland	7 ± 3	1 of 4	1.96	None
Crop	12 ± 3	2 of 4	3.00	None
Midgut	3 ± 1	0 of 4	0.80	None
Tubule	5 ± 1	0 of 4	1.30	None
Hindgut	11 ± 0	2 of 4	2.90	Up
Heart	2 ± 0	0 of 4	0.65	None
Fat body	21 ± 10	3 of 4	5.36	Up
Ovary	4 ± 0	0 of 4	1.10	None
Testis	7 ± 0	3 of 4	1.90	Up
Male accessory glands	14 ± 3	2 of 4	3.70	Up
Virgin spermatheca	6 ± 0	1 of 4	1.61	Up
Mated spermatheca	8 ± 1	3 of 4	2.06	Up
Adult carcass	3 ± 0	0 of 4	0.80	None
Larval CNS	15 ± 2	4 of 4	3.94	Up
Larval Salivary gland	3 ± 1	1 of 4	0.74	None
Larval midgut	2 ± 0	0 of 4	0.69	None
Larval tubule	8 ± 1	0 of 4	2.00	None
Larval hindgut	7 ± 1	1 of 4	1.80	None
Larval fat body	10 ± 2	1 of 4	2.70	None
Larval trachea	11 ± 3	4 of 4	2.81	Up
Larval carcass	6 ± 0	2 of 4	1.55	Up
S2 cells (growing)	8 ± 1	4 of 4	2.18	Up
Whole fly	4 ± 0	0 of 4

Looking for FBgn0262123. 3 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720