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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0262417 through 18771 annotations produced 1 hits



():

Annotation Number : HDC11397
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID :
Gbrowse : chr3L:21660870-21661821 (-) // 100.0 //
Probeset : 1623611_at
Accessions : protein= , nucleotide=


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 00 of 4 0.40None
Head2 00 of 4 0.50None
Eye1 00 of 4 0.25None
Thoracicoabdominal ganglion1 00 of 4 0.30None
Salivary gland5 20 of 4 1.13None
Crop9 10 of 4 1.90None
Midgut3 00 of 4 0.70None
Tubule3 00 of 4 0.60Down
Hindgut5 00 of 4 1.00None
Heart5 10 of 4 1.15None
Fat body6 30 of 4 1.33None
Ovary1 00 of 4 0.30None
Testis9 11 of 4 1.90None
Male accessory glands5 30 of 4 1.10None
Virgin spermatheca2 00 of 4 0.52None
Mated spermatheca2 10 of 4 0.58None
Adult carcass3 10 of 4 0.60None
Larval CNS3 20 of 4 0.69None
Larval Salivary gland1 00 of 4 0.25None
Larval midgut1 00 of 4 0.23None
Larval tubule4 10 of 4 0.90None
Larval hindgut3 10 of 4 0.68None
Larval fat body1 00 of 4 0.30None
Larval trachea0 10 of 4 0.19None
Larval carcass3 10 of 4 0.78None
S2 cells (growing)1 00 of 4 0.36None
Whole fly5 10 of 4

Looking for FBgn0262417. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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