Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

 University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)

Searching for FBGN0262479 through 18771 annotations produced 1 hits


():

Annotation Number : HDC07231
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID :
Gbrowse : chr2R:14750390-14750631 (+) // 100.0 //
Probeset : 1641203_at
Accessions : protein= , nucleotide=


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain3 ± 10 of 4 0.10Down
Head4 ± 10 of 4 0.10Down
Eye3 ± 10 of 4 0.07Down
Thoracicoabdominal ganglion3 ± 11 of 4 0.10Down
Salivary gland10 ± 21 of 4 0.22Down
Crop4 ± 01 of 4 0.10Down
Midgut6 ± 10 of 4 0.10Down
Tubule5 ± 00 of 4 0.10Down
Hindgut5 ± 10 of 4 0.10Down
Heart1 ± 00 of 4 0.03Down
Fat body7 ± 30 of 4 0.14Down
Ovary1 ± 00 of 4 0.00Down
Testis637 ± 284 of 412.60Up
Male accessory glands7 ± 10 of 4 0.10Down
Virgin spermatheca9 ± 00 of 4 0.19Down
Mated spermatheca6 ± 20 of 4 0.14Down
Adult carcass9 ± 10 of 4 0.20Down
Larval CNS3 ± 32 of 4 0.07Down
Larval Salivary gland3 ± 00 of 4 0.07Down
Larval midgut6 ± 00 of 4 0.13Down
Larval tubule4 ± 10 of 4 0.10Down
Larval hindgut1 ± 00 of 4 0.04Down
Larval fat body65 ± 323 of 4 1.30None
Larval trachea6 ± 61 of 4 0.12Down
Larval carcass3 ± 10 of 4 0.08Down
S2 cells (growing)3 ± 11 of 4 0.07Down
Whole fly50 ± 34 of 4

Looking for FBgn0262479. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime