FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0262514 through 18771 annotations produced 1 hits

():

Annotation Number : CG7026
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038276
Gbrowse : chr3R:10725360-10725966 (-) // 100.0 //
Probeset : 1623034_at
Accessions : protein= NP_650406;, nucleotide= NM_142149;
Pathway : "0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electro
Interpro : proton-transporting domain // inferred from electronic annotation /// 0033179 // proton-transporting V-type ATPase
FlyMine data for FBgn0038276.
VDRC has 2 RNAi stocks for FBgn0038276 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1 ± 0	0 of 4	0.10	Down
Head	2 ± 1	0 of 4	0.10	Down
Eye	4 ± 1	0 of 4	0.16	Down
Thoracicoabdominal ganglion	2 ± 1	0 of 4	0.10	Down
Salivary gland	5 ± 1	0 of 4	0.20	Down
Crop	2 ± 1	0 of 4	0.10	Down
Midgut	1 ± 0	0 of 4	0.10	Down
Tubule	3 ± 0	0 of 4	0.10	Down
Hindgut	3 ± 1	0 of 4	0.10	Down
Heart	3 ± 1	0 of 4	0.11	Down
Fat body	9 ± 4	0 of 4	0.37	Down
Ovary	1 ± 0	0 of 4	0.10	Down
Testis	370 ± 20	4 of 4	13.70	Up
Male accessory glands	5 ± 2	0 of 4	0.20	Down
Virgin spermatheca	2 ± 0	0 of 4	0.11	Down
Mated spermatheca	2 ± 1	0 of 4	0.10	Down
Adult carcass	2 ± 0	0 of 4	0.10	Down
Larval CNS	2 ± 1	0 of 4	0.08	Down
Larval Salivary gland	8 ± 1	2 of 4	0.32	Down
Larval midgut	4 ± 1	0 of 4	0.17	Down
Larval tubule	1 ± 0	0 of 4	0.00	Down
Larval hindgut	7 ± 0	0 of 4	0.29	Down
Larval fat body	64 ± 35	4 of 4	2.40	None
Larval trachea	7 ± 2	2 of 4	0.28	Down
Larval carcass	6 ± 1	0 of 4	0.23	Down
S2 cells (growing)	2 ± 0	0 of 4	0.11	Down
Whole fly	27 ± 1	4 of 4

Looking for FBgn0262514. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720