FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0262562 through 18771 annotations produced 2 hits

(CG43102):

Annotation Number : CG7397
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038543
Gbrowse : chr3R:13595815-13600009 (-) // 100.0 //
Probeset : 1628396_at
Accessions : protein= NP_650653;, nucleotide= NM_142396;
Pathway : 0005622 // intracellular // inferred from electronic annotation
Interpro : 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation
FlyMine data for FBgn0038543.
Homophila reports that CG7397 is a close match (2e-12) to human gene ARHGEF9;KIAA0424;PEM2 (NP_056000), a gene associated with Hyperekplexia and epilepsy, 300607 (3).
VDRC has 5 RNAi stocks for FBgn0038543 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	13 ± 1	3 of 4	3.20	Up
Head	2 ± 0	0 of 4	0.40	None
Eye	2 ± 1	0 of 4	0.59	None
Thoracicoabdominal ganglion	3 ± 1	0 of 4	0.70	None
Salivary gland	10 ± 4	0 of 4	2.33	None
Crop	10 ± 1	1 of 4	2.40	Up
Midgut	2 ± 1	0 of 4	0.60	None
Tubule	2 ± 0	0 of 4	0.50	Down
Hindgut	4 ± 1	0 of 4	0.90	None
Heart	3 ± 2	0 of 4	0.86	None
Fat body	0 ± 0	0 of 4	0.19	None
Ovary	2 ± 0	0 of 4	0.50	None
Testis	1 ± 0	0 of 4	0.40	None
Male accessory glands	2 ± 1	0 of 4	0.70	None
Virgin spermatheca	1 ± 0	0 of 4	0.35	None
Mated spermatheca	1 ± 0	0 of 4	0.22	None
Adult carcass	3 ± 1	0 of 4	0.80	None
Larval CNS	1 ± 1	0 of 4	0.36	None
Larval Salivary gland	1 ± 0	0 of 4	0.32	None
Larval midgut	2 ± 1	0 of 4	0.60	None
Larval tubule	6 ± 1	0 of 4	1.40	None
Larval hindgut	1 ± 0	0 of 4	0.42	None
Larval fat body	1 ± 0	0 of 4	0.40	None
Larval trachea	2 ± 1	0 of 4	0.67	None
Larval carcass	3 ± 0	0 of 4	0.72	None
S2 cells (growing)	1 ± 0	0 of 4	0.25	None
Whole fly	4 ± 1	1 of 4

(CG43102):

Annotation Number : CG14318
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038544
Gbrowse : chr3R:13602967-13609720 (-) // 100.0 //
Probeset : 1641457_at
Accessions : protein= NP_650654;, nucleotide= NM_142397;
FlyMine data for FBgn0038544.
VDRC has 5 RNAi stocks for FBgn0038544 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	4 ± 2	0 of 4	1.50	None
Head	5 ± 2	0 of 4	1.80	None
Eye	8 ± 3	1 of 4	2.98	None
Thoracicoabdominal ganglion	7 ± 1	0 of 4	2.50	None
Salivary gland	16 ± 4	0 of 4	5.65	None
Crop	8 ± 1	0 of 4	2.90	None
Midgut	4 ± 1	0 of 4	1.40	None
Tubule	9 ± 1	0 of 4	3.20	Up
Hindgut	7 ± 1	0 of 4	2.50	None
Heart	6 ± 1	0 of 4	2.19	None
Fat body	6 ± 3	0 of 4	2.43	None
Ovary	4 ± 1	0 of 4	1.40	None
Testis	6 ± 1	2 of 4	2.40	Up
Male accessory glands	13 ± 3	1 of 4	4.60	None
Virgin spermatheca	8 ± 2	0 of 4	2.90	None
Mated spermatheca	9 ± 3	0 of 4	3.46	None
Adult carcass	6 ± 2	0 of 4	2.30	None
Larval CNS	3 ± 2	0 of 4	1.38	None
Larval Salivary gland	6 ± 1	0 of 4	2.35	None
Larval midgut	6 ± 1	0 of 4	2.14	None
Larval tubule	7 ± 3	0 of 4	2.50	None
Larval hindgut	7 ± 2	0 of 4	2.57	None
Larval fat body	17 ± 1	2 of 4	6.00	Up
Larval trachea	2 ± 1	0 of 4	0.79	None
Larval carcass	11 ± 2	0 of 4	4.11	Up
S2 cells (growing)	9 ± 1	0 of 4	3.26	Up
Whole fly	2 ± 1	0 of 4

Looking for FBgn0262562. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720