FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for HDC07758 through 18771 annotations produced 1 hits

(CG34267):

Annotation Number : HDC07758
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085296
Gbrowse : chr3L:501024-501339 (+) // 97.01 // /// chr3L:500076-500373 (-) // 100.0 //
Probeset : 1626025_at
Accessions : protein= NP_001097464;, nucleotide= NM_001103994;
FlyMine data for FBgn0085296.
VDRC has 1 RNAi stocks for FBgn0085296 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2 ± 0	0 of 4	0.10	None
Head	2 ± 0	0 of 4	0.10	None
Eye	6 ± 2	0 of 4	0.18	None
Thoracicoabdominal ganglion	7 ± 2	0 of 4	0.20	None
Salivary gland	23 ± 5	0 of 4	0.66	None
Crop	21 ± 2	0 of 4	0.60	None
Midgut	52 ± 8	4 of 4	1.50	None
Tubule	11 ± 1	0 of 4	0.30	Down
Hindgut	12 ± 3	0 of 4	0.40	None
Heart	3 ± 1	0 of 4	0.09	None
Fat body	3 ± 0	0 of 4	0.09	None
Ovary	10 ± 1	0 of 4	0.30	None
Testis	14 ± 0	1 of 4	0.40	None
Male accessory glands	7 ± 1	0 of 4	0.20	None
Virgin spermatheca	10 ± 3	0 of 4	0.30	None
Mated spermatheca	7 ± 3	0 of 4	0.22	None
Adult carcass	4 ± 1	0 of 4	0.10	None
Larval CNS	4 ± 2	0 of 4	0.14	None
Larval Salivary gland	17 ± 3	0 of 4	0.51	None
Larval midgut	38 ± 6	0 of 4	1.08	None
Larval tubule	29 ± 1	2 of 4	0.80	None
Larval hindgut	11 ± 3	0 of 4	0.33	None
Larval fat body	28 ± 3	0 of 4	0.80	None
Larval trachea	11 ± 6	0 of 4	0.32	None
Larval carcass	175 ± 108	4 of 4	4.96	None
S2 cells (growing)	24 ± 2	0 of 4	0.68	None
Whole fly	35 ± 13	2 of 4

Looking for HDC07758. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720