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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for HDC09365 through 18771 annotations produced 1 hits



Drosophila insulin-like peptide 5 (Ilp5):

Annotation Number : HDC09365
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0044048
Gbrowse : chr3L:9816575-9816973 (-) // 100.0 //
Probeset : 1624745_at
Accessions : protein= NP_996037;, nucleotide= NM_206315;
Pathway : 0005576 // extracellular region // inferred from sequence or structural similarity /// 0005576 // extracellular region /
Interpro : 0005158 // insulin receptor binding // inferred from sequence or structural similarity /// 0005179 // hormone activity /
FlyMine data for FBgn0044048.
TRiP has 2 RNAi stocks for FBgn0044048 available for purchase.
VDRC has 3 RNAi stocks for FBgn0044048 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain683 ± 144 of 441.80Up
Head184 ± 84 of 411.30Up
Eye4 ± 00 of 4 0.29Down
Thoracicoabdominal ganglion4 ± 10 of 4 0.30Down
Salivary gland10 ± 20 of 4 0.62None
Crop9 ± 11 of 4 0.60Down
Midgut12 ± 24 of 4 0.70None
Tubule10 ± 12 of 4 0.60Down
Hindgut7 ± 02 of 4 0.40Down
Heart2 ± 10 of 4 0.18Down
Fat body8 ± 11 of 4 0.54Down
Ovary4 ± 20 of 4 0.30Down
Testis6 ± 00 of 4 0.40Down
Male accessory glands10 ± 21 of 4 0.60None
Virgin spermatheca8 ± 11 of 4 0.54Down
Mated spermatheca5 ± 10 of 4 0.35Down
Adult carcass15 ± 13 of 4 0.90None
Larval CNS630 ± 1244 of 438.64Up
Larval Salivary gland10 ± 22 of 4 0.64None
Larval midgut9 ± 12 of 4 0.56Down
Larval tubule286 ± 184 of 417.50Up
Larval hindgut8 ± 13 of 4 0.53Down
Larval fat body16 ± 32 of 4 1.00None
Larval trachea4 ± 10 of 4 0.26Down
Larval carcass10 ± 12 of 4 0.66Down
S2 cells (growing)8 ± 03 of 4 0.49Down
Whole fly16 ± 04 of 4

Looking for HDC09365. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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