Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for HDC10294 through 18771 annotations produced 1 hits



Box B-binding factor 2 (CrebA):

Annotation Number : HDC10294
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID :
Gbrowse : chr3L:15525560-15525836 (+) // 92.31 //
Probeset : 1626210_at
Accessions : protein= NP_524087; /// NP_996096;, nucleotide= NM_079363; /// NM_206374;
Pathway : DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II
Interpro : 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 //


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 ± 10 of 4 1.10None
Head4 ± 12 of 4 1.80None
Eye1 ± 00 of 4 0.52None
Thoracicoabdominal ganglion1 ± 00 of 4 0.50None
Salivary gland12 ± 20 of 4 5.04Up
Crop5 ± 10 of 4 2.30None
Midgut3 ± 10 of 4 1.30None
Tubule5 ± 00 of 4 2.20Up
Hindgut4 ± 11 of 4 1.70None
Heart3 ± 10 of 4 1.18None
Fat body7 ± 61 of 4 2.77None
Ovary0 ± 00 of 4 0.30None
Testis1 ± 00 of 4 0.50None
Male accessory glands4 ± 10 of 4 1.60None
Virgin spermatheca6 ± 12 of 4 2.55None
Mated spermatheca7 ± 21 of 4 2.91None
Adult carcass6 ± 20 of 4 2.40None
Larval CNS5 ± 13 of 4 2.33Up
Larval Salivary gland2 ± 00 of 4 0.95None
Larval midgut1 ± 00 of 4 0.50None
Larval tubule2 ± 01 of 4 1.10None
Larval hindgut2 ± 10 of 4 0.92None
Larval fat body6 ± 10 of 4 2.60None
Larval trachea2 ± 20 of 4 0.87None
Larval carcass1 ± 00 of 4 0.66None
S2 cells (growing)1 ± 00 of 4 0.48None
Whole fly2 ± 01 of 4

Looking for HDC10294. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime