Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for HDC15864 through 18771 annotations produced 1 hits



(CG34292):

Annotation Number : HDC15864
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085321
Gbrowse : chr3R:22887997-22888586 (+) // 100.0 //
Probeset : 1636457_at
Accessions : protein= NP_001097941;, nucleotide= NM_001104471;
FlyMine data for FBgn0085321.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain7 ± 12 of 4 0.10Down
Head2 ± 10 of 4 0.00Down
Eye0 ± 00 of 4 0.01Down
Thoracicoabdominal ganglion4 ± 10 of 4 0.00Down
Salivary gland5 ± 30 of 4 0.07Down
Crop7 ± 10 of 4 0.10Down
Midgut8 ± 20 of 4 0.10Down
Tubule5 ± 10 of 4 0.10Down
Hindgut9 ± 11 of 4 0.10Down
Heart1 ± 00 of 4 0.01Down
Fat body7 ± 42 of 4 0.09Down
Ovary3 ± 01 of 4 0.00Down
Testis702 ± 584 of 4 8.30Up
Male accessory glands13 ± 10 of 4 0.20Down
Virgin spermatheca4 ± 10 of 4 0.05Down
Mated spermatheca4 ± 10 of 4 0.05Down
Adult carcass12 ± 01 of 4 0.10Down
Larval CNS3 ± 00 of 4 0.04Down
Larval Salivary gland7 ± 10 of 4 0.09Down
Larval midgut6 ± 00 of 4 0.07Down
Larval tubule8 ± 00 of 4 0.10Down
Larval hindgut8 ± 11 of 4 0.09Down
Larval fat body95 ± 533 of 4 1.10None
Larval trachea6 ± 71 of 4 0.08Down
Larval carcass7 ± 11 of 4 0.09Down
S2 cells (growing)3 ± 10 of 4 0.04Down
Whole fly84 ± 104 of 4

Looking for HDC15864. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime