FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for HDC16707 through 18771 annotations produced 2 hits

Thd1 (Thd1):

Annotation Number : HDC16707
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0026869
Gbrowse : chr4:577493-578199 (-) // 100.0 //
Probeset : 1628905_at
Accessions : protein= NP_651925;, nucleotide= NM_143668;
Interpro : "0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred fr
FlyMine data for FBgn0026869.
BDGP gene expression has embryonic in situ data for Thd1: 13 pix of staining in 5 body parts.
TRiP has 2 RNAi stocks for FBgn0026869 available for purchase.
VDRC has 2 RNAi stocks for FBgn0026869 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	4 ± 1	0 of 4	1.80	None
Head	3 ± 0	0 of 4	1.30	None
Eye	1 ± 1	0 of 4	0.71	None
Thoracicoabdominal ganglion	4 ± 1	0 of 4	1.90	None
Salivary gland	26 ± 3	0 of 4	10.25	Up
Crop	11 ± 1	0 of 4	4.30	Up
Midgut	13 ± 1	0 of 4	5.20	Up
Tubule	7 ± 1	0 of 4	2.90	Up
Hindgut	10 ± 1	0 of 4	4.00	Up
Heart	3 ± 1	0 of 4	1.39	None
Fat body	18 ± 6	0 of 4	7.28	Up
Ovary	5 ± 0	0 of 4	2.00	None
Testis	2 ± 0	0 of 4	0.80	None
Male accessory glands	8 ± 3	0 of 4	3.10	None
Virgin spermatheca	16 ± 3	0 of 4	6.20	Up
Mated spermatheca	9 ± 2	0 of 4	3.62	None
Adult carcass	8 ± 4	0 of 4	3.10	None
Larval CNS	8 ± 1	0 of 4	3.12	Up
Larval Salivary gland	3 ± 1	0 of 4	1.51	None
Larval midgut	3 ± 1	0 of 4	1.19	None
Larval tubule	5 ± 1	0 of 4	2.00	None
Larval hindgut	7 ± 2	0 of 4	3.08	None
Larval fat body	10 ± 3	0 of 4	4.20	None
Larval trachea	5 ± 3	1 of 4	2.08	None
Larval carcass	4 ± 1	0 of 4	1.84	None
S2 cells (growing)	8 ± 2	0 of 4	3.17	None
Whole fly	2 ± 0	0 of 4

Thd1 (Thd1):

Annotation Number : HDC16707
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0026869
Gbrowse : chr4:577493-578199 (-) // 100.0 //
Probeset : 1630450_s_at
Accessions : protein= NP_651925;, nucleotide= NM_143668;
Interpro : "0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred fr
FlyMine data for FBgn0026869.
BDGP gene expression has embryonic in situ data for Thd1: 13 pix of staining in 5 body parts.
TRiP has 2 RNAi stocks for FBgn0026869 available for purchase.
VDRC has 2 RNAi stocks for FBgn0026869 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	39 ± 5	4 of 4	2.00	Up
Head	35 ± 3	4 of 4	1.80	Up
Eye	38 ± 2	4 of 4	1.95	Up
Thoracicoabdominal ganglion	28 ± 4	4 of 4	1.50	None
Salivary gland	59 ± 0	4 of 4	3.00	Up
Crop	81 ± 4	4 of 4	4.10	Up
Midgut	34 ± 1	4 of 4	1.70	Up
Tubule	70 ± 5	4 of 4	3.60	Up
Hindgut	60 ± 4	4 of 4	3.10	Up
Heart	47 ± 1	4 of 4	2.39	Up
Fat body	52 ± 9	4 of 4	2.66	Up
Ovary	31 ± 1	4 of 4	1.60	Up
Testis	7 ± 1	4 of 4	0.40	Down
Male accessory glands	76 ± 2	4 of 4	3.90	Up
Virgin spermatheca	37 ± 2	4 of 4	1.89	Up
Mated spermatheca	47 ± 6	4 of 4	2.42	Up
Adult carcass	31 ± 6	4 of 4	1.60	None
Larval CNS	28 ± 4	4 of 4	1.43	None
Larval Salivary gland	52 ± 4	4 of 4	2.66	Up
Larval midgut	20 ± 5	4 of 4	1.03	None
Larval tubule	39 ± 5	4 of 4	2.00	Up
Larval hindgut	32 ± 2	4 of 4	1.64	Up
Larval fat body	41 ± 2	4 of 4	2.10	Up
Larval trachea	47 ± 5	4 of 4	2.40	Up
Larval carcass	53 ± 4	4 of 4	2.71	Up
S2 cells (growing)	146 ± 1	4 of 4	7.41	Up
Whole fly	19 ± 2	4 of 4

Looking for HDC16707. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720