Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for HDC18536 through 18771 annotations produced 2 hits



regucalcin (regucalcin):

Annotation Number : HDC18536
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030362
Gbrowse : chrX:11908287-11908559 (+) // 93.79 //
Probeset : 1638249_at
Accessions : protein= NP_572775; /// NP_727586; /// NP_727587; /// NP_727588;, nucleotide= NM_132547; /// NM_167314; /// NM_167315; /// NM_167316;
Pathway : 0005811 // lipid particle // inferred from direct assay
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0030362.
TRiP has 1 RNAi stocks for FBgn0030362 available for purchase.
VDRC has 3 RNAi stocks for FBgn0030362 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain11 01 of 4 1.70None
Head4 10 of 4 0.60None
Eye6 20 of 4 1.00None
Thoracicoabdominal ganglion14 13 of 4 2.10Up
Salivary gland16 41 of 4 2.53None
Crop9 20 of 4 1.40None
Midgut12 11 of 4 1.80None
Tubule9 00 of 4 1.50Up
Hindgut8 12 of 4 1.30None
Heart3 00 of 4 0.56None
Fat body8 30 of 4 1.23None
Ovary4 11 of 4 0.60None
Testis5 10 of 4 0.80None
Male accessory glands14 30 of 4 2.20None
Virgin spermatheca6 10 of 4 1.03None
Mated spermatheca10 00 of 4 1.59None
Adult carcass15 30 of 4 2.30None
Larval CNS7 22 of 4 1.11None
Larval Salivary gland14 22 of 4 2.14None
Larval midgut10 10 of 4 1.52None
Larval tubule10 11 of 4 1.60None
Larval hindgut6 00 of 4 1.03None
Larval fat body6 10 of 4 0.90None
Larval trachea8 31 of 4 1.28None
Larval carcass12 12 of 4 1.84None
S2 cells (growing)10 11 of 4 1.66None
Whole fly6 10 of 4



regucalcin (regucalcin):

Annotation Number : HDC18536
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030362
Gbrowse : chrX:11908287-11908559 (+) // 93.79 //
Probeset : 1629430_s_at
Accessions : protein= NP_572775; /// NP_727586; /// NP_727587; /// NP_727588;, nucleotide= NM_132547; /// NM_167314; /// NM_167315; /// NM_167316;
Pathway : 0005811 // lipid particle // inferred from direct assay
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0030362.
TRiP has 1 RNAi stocks for FBgn0030362 available for purchase.
VDRC has 3 RNAi stocks for FBgn0030362 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain233 184 of 4 1.60None
Head720 1664 of 4 5.10Up
Eye161 224 of 4 1.13None
Thoracicoabdominal ganglion53 44 of 4 0.40Down
Salivary gland18 43 of 4 0.13Down
Crop18 24 of 4 0.10Down
Midgut203 94 of 4 1.40None
Tubule9 12 of 4 0.10Down
Hindgut26 14 of 4 0.20Down
Heart2823 1474 of 419.79Up
Fat body514 1384 of 4 3.60Up
Ovary3 00 of 4 0.00Down
Testis195 154 of 4 1.40None
Male accessory glands21 42 of 4 0.10Down
Virgin spermatheca7 10 of 4 0.05Down
Mated spermatheca6 20 of 4 0.04Down
Adult carcass645 644 of 4 4.50Up
Larval CNS6 24 of 4 0.05Down
Larval Salivary gland170 134 of 4 1.19None
Larval midgut118 114 of 4 0.83None
Larval tubule577 194 of 4 4.00Up
Larval hindgut74 154 of 4 0.52None
Larval fat body3170 4294 of 422.20Up
Larval trachea413 1014 of 4 2.90Up
Larval carcass492 424 of 4 3.45Up
S2 cells (growing)573 154 of 4 4.02Up
Whole fly142 244 of 4

Looking for HDC18536. 2 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime