FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for S.C2R000882 through 18771 annotations produced 1 hits

transcript group III (E(Pc)):

Annotation Number : S.C2R000882
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0000581
Gbrowse : chr2R:7341097-7341697 (+) // 100.0 //
Probeset : 1625705_s_at
Accessions : protein= NP_523698; /// NP_725054;, nucleotide= NM_078974; /// NM_165836;
Pathway : 0000785 // chromatin // non-traceable author statement /// 0005700 // polytene chromosome // inferred from direct assay
Interpro : 0004402 // histone acetyltransferase activity // inferred from direct assay
FlyMine data for FBgn0000581.
BDGP gene expression has embryonic in situ data for E(Pc): 11 pix of staining in 3 body parts.
TRiP has 2 RNAi stocks for FBgn0000581 available for purchase.
VDRC has 2 RNAi stocks for FBgn0000581 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	9 ± 0	4 of 4	0.90	None
Head	9 ± 1	3 of 4	1.00	None
Eye	8 ± 0	3 of 4	0.86	None
Thoracicoabdominal ganglion	8 ± 1	1 of 4	0.90	None
Salivary gland	27 ± 8	0 of 4	2.78	None
Crop	9 ± 2	1 of 4	1.00	None
Midgut	13 ± 2	2 of 4	1.40	None
Tubule	8 ± 0	0 of 4	0.80	None
Hindgut	12 ± 1	0 of 4	1.20	None
Heart	6 ± 1	1 of 4	0.67	None
Fat body	10 ± 1	2 of 4	1.09	None
Ovary	17 ± 0	4 of 4	1.80	Up
Testis	7 ± 0	2 of 4	0.70	None
Male accessory glands	24 ± 2	4 of 4	2.40	Up
Virgin spermatheca	11 ± 2	1 of 4	1.14	None
Mated spermatheca	11 ± 1	2 of 4	1.18	None
Adult carcass	22 ± 4	2 of 4	2.30	Up
Larval CNS	8 ± 4	3 of 4	0.82	None
Larval Salivary gland	17 ± 1	2 of 4	1.80	Up
Larval midgut	17 ± 1	4 of 4	1.74	Up
Larval tubule	12 ± 1	2 of 4	1.20	None
Larval hindgut	10 ± 1	3 of 4	1.01	None
Larval fat body	12 ± 4	2 of 4	1.20	None
Larval trachea	11 ± 4	4 of 4	1.18	None
Larval carcass	11 ± 0	3 of 4	1.16	None
S2 cells (growing)	15 ± 1	3 of 4	1.56	None
Whole fly	9 ± 1	1 of 4

Looking for S.C2R000882. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720