Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for S.C3R002771 through 18771 annotations produced 1 hits



(CG34150):

Annotation Number : S.C3R002771
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0083986
Gbrowse : chr3R:20636962-20640356 (+) // 100.0 //
Probeset : 1626728_at
Accessions : protein= NP_001036756;, nucleotide= NM_001043291;
FlyMine data for FBgn0083986.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain21 ± 24 of 4 1.40None
Head17 ± 22 of 4 1.20None
Eye17 ± 22 of 4 1.23None
Thoracicoabdominal ganglion24 ± 14 of 4 1.70Up
Salivary gland23 ± 80 of 4 1.60None
Crop17 ± 12 of 4 1.20None
Midgut9 ± 20 of 4 0.60None
Tubule14 ± 10 of 4 1.00None
Hindgut9 ± 20 of 4 0.60None
Heart10 ± 12 of 4 0.74None
Fat body8 ± 50 of 4 0.55None
Ovary10 ± 32 of 4 0.70None
Testis20 ± 24 of 4 1.40None
Male accessory glands15 ± 31 of 4 1.00None
Virgin spermatheca3 ± 10 of 4 0.22Down
Mated spermatheca4 ± 10 of 4 0.29Down
Adult carcass24 ± 30 of 4 1.60Up
Larval CNS11 ± 23 of 4 0.80None
Larval Salivary gland14 ± 22 of 4 1.00None
Larval midgut12 ± 20 of 4 0.84None
Larval tubule11 ± 30 of 4 0.80None
Larval hindgut8 ± 11 of 4 0.61Down
Larval fat body16 ± 21 of 4 1.10None
Larval trachea4 ± 30 of 4 0.31Down
Larval carcass11 ± 10 of 4 0.77Down
S2 cells (growing)18 ± 13 of 4 1.24None
Whole fly14 ± 01 of 4

Looking for S.C3R002771. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime