FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for S.CX000003 through 18771 annotations produced 1 hits

/// cinnamon (CG42376 /// cin):

Annotation Number : S.CX000003
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0000316 /// FBgn0259722
Gbrowse : chrX:149101-149351 (+) // 100.0 //
Probeset : 1626762_s_at
Accessions : protein= NP_001138136; /// NP_001138137; /// NP_001138138; /// NP_477030; /// NP_726659;, nucleotide= NM_001144664; /// NM_001144665; /// NM_001144666; /// NM_057682; /// NM_166835;
Pathway : 0005739 // mitochondrion // inferred from electronic annotation
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from
FlyMine data for FBgn0000316 /// FBgn0259722.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	363 ± 13	4 of 4	0.90	None
Head	456 ± 11	4 of 4	1.20	Up
Eye	521 ± 26	4 of 4	1.33	Up
Thoracicoabdominal ganglion	370 ± 2	4 of 4	0.90	None
Salivary gland	700 ± 7	4 of 4	1.79	Up
Crop	588 ± 34	4 of 4	1.50	Up
Midgut	545 ± 16	4 of 4	1.40	Up
Tubule	480 ± 13	4 of 4	1.20	Up
Hindgut	718 ± 18	4 of 4	1.80	Up
Heart	658 ± 35	4 of 4	1.68	Up
Fat body	467 ± 62	4 of 4	1.19	None
Ovary	367 ± 1	4 of 4	0.90	None
Testis	71 ± 2	4 of 4	0.20	Down
Male accessory glands	463 ± 19	4 of 4	1.20	Up
Virgin spermatheca	406 ± 15	4 of 4	1.04	None
Mated spermatheca	440 ± 35	4 of 4	1.12	None
Adult carcass	674 ± 30	4 of 4	1.70	Up
Larval CNS	341 ± 19	4 of 4	0.87	None
Larval Salivary gland	263 ± 4	4 of 4	0.67	Down
Larval midgut	408 ± 20	4 of 4	1.04	None
Larval tubule	538 ± 11	4 of 4	1.40	Up
Larval hindgut	393 ± 12	4 of 4	1.00	None
Larval fat body	319 ± 23	4 of 4	0.80	None
Larval trachea	302 ± 25	4 of 4	0.77	Down
Larval carcass	547 ± 56	4 of 4	1.39	None
S2 cells (growing)	251 ± 13	4 of 4	0.64	Down
Whole fly	392 ± 21	4 of 4

Looking for S.CX000003. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720