FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for STENCIL:2L:25151:23928:GENSCAN through 18771 annotations produced 1 hits

CG2657 (Ir21a):

Annotation Number : Stencil:2L:25151:23928:GENSCAN
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031209
Gbrowse : chr2L:23928-25151 (-) // 100.0 //
Probeset : 1626140_at
Accessions : protein= NP_001097043;, nucleotide= NM_001103573;
Pathway : 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electron
Interpro : 0004872 // receptor activity // inferred from electronic annotation /// 0004970 // ionotropic glutamate receptor activit
FlyMine data for FBgn0031209.
VDRC has 2 RNAi stocks for FBgn0031209 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2 ± 1	1 of 4	0.50	None
Head	3 ± 1	0 of 4	0.80	None
Eye	5 ± 0	1 of 4	1.18	None
Thoracicoabdominal ganglion	4 ± 1	1 of 4	1.00	None
Salivary gland	5 ± 1	0 of 4	1.16	None
Crop	2 ± 0	0 of 4	0.60	None
Midgut	6 ± 0	0 of 4	1.40	None
Tubule	4 ± 0	0 of 4	0.90	None
Hindgut	3 ± 1	1 of 4	0.80	None
Heart	2 ± 1	0 of 4	0.61	None
Fat body	10 ± 2	1 of 4	2.31	Up
Ovary	2 ± 1	0 of 4	0.50	None
Testis	3 ± 0	1 of 4	0.90	None
Male accessory glands	6 ± 1	2 of 4	1.50	None
Virgin spermatheca	5 ± 0	3 of 4	1.18	None
Mated spermatheca	5 ± 1	2 of 4	1.29	None
Adult carcass	8 ± 1	0 of 4	1.90	None
Larval CNS	2 ± 0	2 of 4	0.56	None
Larval Salivary gland	6 ± 1	0 of 4	1.51	None
Larval midgut	7 ± 1	2 of 4	1.60	None
Larval tubule	4 ± 2	1 of 4	1.00	None
Larval hindgut	4 ± 0	1 of 4	0.92	None
Larval fat body	8 ± 0	0 of 4	1.80	None
Larval trachea	2 ± 2	0 of 4	0.59	None
Larval carcass	5 ± 1	0 of 4	1.15	None
S2 cells (growing)	1 ± 0	0 of 4	0.41	None
Whole fly	4 ± 1	2 of 4

Looking for Stencil:2L:25151:23928:GENSCAN. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720