FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for STENCIL:3L:11067007:11066395:GENSCAN through 18771 annotations produced 1 hits

(CG34012):

Annotation Number : Stencil:3L:11067007:11066395:GENSCAN
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0054012
Gbrowse : chr3L:11101963-11102575 (-) // 100.0 //
Probeset : 1636957_s_at
Accessions : protein= NP_001034001;, nucleotide= NM_001038912;
FlyMine data for FBgn0054012.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	3 ± 1	1 of 4	0.10	Down
Head	5 ± 1	1 of 4	0.10	Down
Eye	1 ± 0	0 of 4	0.02	Down
Thoracicoabdominal ganglion	2 ± 0	0 of 4	0.00	Down
Salivary gland	11 ± 1	0 of 4	0.20	Down
Crop	5 ± 1	1 of 4	0.10	Down
Midgut	3 ± 0	0 of 4	0.10	Down
Tubule	4 ± 1	0 of 4	0.10	Down
Hindgut	6 ± 0	0 of 4	0.10	Down
Heart	1 ± 0	0 of 4	0.02	Down
Fat body	9 ± 4	0 of 4	0.18	Down
Ovary	2 ± 0	0 of 4	0.00	Down
Testis	692 ± 16	4 of 4	12.40	Up
Male accessory glands	3 ± 1	0 of 4	0.10	Down
Virgin spermatheca	4 ± 0	0 of 4	0.09	Down
Mated spermatheca	3 ± 1	0 of 4	0.06	Down
Adult carcass	4 ± 2	0 of 4	0.10	Down
Larval CNS	4 ± 1	2 of 4	0.08	Down
Larval Salivary gland	5 ± 0	0 of 4	0.10	Down
Larval midgut	3 ± 0	0 of 4	0.06	Down
Larval tubule	3 ± 1	0 of 4	0.10	Down
Larval hindgut	2 ± 0	0 of 4	0.04	Down
Larval fat body	52 ± 24	3 of 4	0.90	None
Larval trachea	5 ± 2	1 of 4	0.10	Down
Larval carcass	6 ± 1	0 of 4	0.12	Down
S2 cells (growing)	2 ± 0	0 of 4	0.04	Down
Whole fly	55 ± 3	4 of 4

Looking for Stencil:3L:11067007:11066395:GENSCAN. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720