FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for STENCIL:3L:20883990:20882739:GENSCAN through 18771 annotations produced 1 hits

(CG12983):

Annotation Number : Stencil:3L:20883990:20882739:GENSCAN
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037040
Gbrowse : chr3L:20958563-20959814 (-) // 100.0 //
Probeset : 1625673_at
Accessions : protein= NP_001137990; /// NP_001137991; /// NP_001137992; /// NP_649274;, nucleotide= NM_001144518; /// NM_001144519; /// NM_001144520; /// NM_141017;
FlyMine data for FBgn0037040.
BDGP gene expression has embryonic in situ data for CG12983: 4 pix of staining in 1 body parts.
VDRC has 3 RNAi stocks for FBgn0037040 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2 ± 0	0 of 4	0.10	Down
Head	3 ± 1	0 of 4	0.20	Down
Eye	1 ± 0	0 of 4	0.07	Down
Thoracicoabdominal ganglion	2 ± 1	0 of 4	0.10	Down
Salivary gland	6 ± 5	0 of 4	0.34	None
Crop	3 ± 1	0 of 4	0.20	Down
Midgut	0 ± 0	0 of 4	0.00	Down
Tubule	3 ± 0	0 of 4	0.10	Down
Hindgut	0 ± 0	0 of 4	0.00	Down
Heart	1 ± 0	0 of 4	0.07	Down
Fat body	9 ± 2	0 of 4	0.46	Down
Ovary	2 ± 0	0 of 4	0.10	Down
Testis	312 ± 18	4 of 4	15.40	Up
Male accessory glands	6 ± 2	0 of 4	0.30	Down
Virgin spermatheca	6 ± 1	1 of 4	0.32	Down
Mated spermatheca	8 ± 1	1 of 4	0.43	Down
Adult carcass	3 ± 1	0 of 4	0.20	Down
Larval CNS	6 ± 2	3 of 4	0.30	Down
Larval Salivary gland	3 ± 1	0 of 4	0.16	Down
Larval midgut	1 ± 0	0 of 4	0.09	Down
Larval tubule	2 ± 0	0 of 4	0.10	Down
Larval hindgut	1 ± 0	0 of 4	0.08	Down
Larval fat body	41 ± 21	3 of 4	2.00	None
Larval trachea	3 ± 1	0 of 4	0.15	Down
Larval carcass	3 ± 1	0 of 4	0.17	Down
S2 cells (growing)	1 ± 0	0 of 4	0.08	Down
Whole fly	20 ± 3	4 of 4

Looking for Stencil:3L:20883990:20882739:GENSCAN. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720