FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for STENCIL:3L:213878:211645:GENSCAN through 18771 annotations produced 1 hits

():

Annotation Number : Stencil:3L:213878:211645:GENSCAN
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID :
Gbrowse : chr3L:231015-233248 (-) // 100.0 //
Probeset : 1626074_at
Accessions : protein= NP_001097457; /// NP_001097458;, nucleotide= NM_001103987; /// NM_001103988;
Interpro : 0004867 // serine-type endopeptidase inhibitor activity // inferred from sequence or structural similarity

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	18 ± 1	4 of 4	0.20	Down
Head	592 ± 44	4 of 4	5.90	Up
Eye	183 ± 31	4 of 4	1.84	None
Thoracicoabdominal ganglion	16 ± 0	4 of 4	0.20	Down
Salivary gland	9 ± 1	0 of 4	0.09	Down
Crop	8 ± 2	2 of 4	0.10	Down
Midgut	22 ± 2	4 of 4	0.20	Down
Tubule	351 ± 106	4 of 4	3.50	Up
Hindgut	15 ± 1	4 of 4	0.20	Down
Heart	203 ± 19	4 of 4	2.05	Up
Fat body	280 ± 19	4 of 4	2.82	Up
Ovary	0 ± 0	0 of 4	0.00	Down
Testis	87 ± 6	4 of 4	0.90	None
Male accessory glands	3 ± 1	0 of 4	0.00	Down
Virgin spermatheca	691 ± 12	4 of 4	6.94	Up
Mated spermatheca	444 ± 46	4 of 4	4.46	Up
Adult carcass	483 ± 21	4 of 4	4.90	Up
Larval CNS	7 ± 1	2 of 4	0.07	Down
Larval Salivary gland	55 ± 7	4 of 4	0.55	Down
Larval midgut	16 ± 1	4 of 4	0.16	Down
Larval tubule	1539 ± 62	4 of 4	15.50	Up
Larval hindgut	60 ± 6	4 of 4	0.60	Down
Larval fat body	3336 ± 244	4 of 4	33.50	Up
Larval trachea	45 ± 28	4 of 4	0.46	Down
Larval carcass	112 ± 12	4 of 4	1.12	None
S2 cells (growing)	163 ± 12	4 of 4	1.64	Up
Whole fly	99 ± 7	4 of 4

Looking for Stencil:3L:213878:211645:GENSCAN. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720