FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for X59545 through 18771 annotations produced 1 hits

chr2R:20615461-20622912 (+) // 98.84 // /// chr2R:6524177-6554159 (+) // 98.01 // /// chr2R:266977-274378 (+) // 97.82 // /// chr2R:6517276-6524619 (+) // 97.18 // /// chr3L:925230-932599 (+) // 97.3 // /// chr3L:2966777-2974144 (+) // 97.41 // /// chr3R:23999446-24006819 (+) // 97.54 // /// chr3R:5663884-5671249 (+) // 97.14 // /// chrX:21567779-21575665 (+) // 98.48 // /// chr2R:10903016-10910383 (-) // 97.45 // /// chr2R:15802404-15809759 (-) // 97.41 // /// chr3RHet:1982292-1989645 (-) // 97.29 // /// chr3RHet:2047905-2055229 (-) // 96.72 // /// chr3L:19110197-19117587 (-) // 97.83 // /// chr3R:17586898-17594233 (-) // 97.15 // /// chr2L:4601758-4609142 (-) // 97.71 // (schnurri):

Annotation Number : X59545
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : full length
Gbrowse : March 2006 (FlyBase/BDGP 5.3)
Probeset : 1625195_s_at
Accessions : protein= , nucleotide= NP_476723; /// NP_476724; /// NP_599106; /// NP_608403; /// NP_995813;
Pathway : 0000122 // negative regulation of transcription from RNA polymerase II promoter // non-traceable author statement /// 00
Interpro : 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement
FlyMine data for full length.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	196 ± 6	4 of 4	0.40	None
Head	240 ± 12	4 of 4	0.50	None
Eye	295 ± 27	4 of 4	0.67	None
Thoracicoabdominal ganglion	128 ± 13	4 of 4	0.30	None
Salivary gland	231 ± 13	4 of 4	0.52	None
Crop	434 ± 73	4 of 4	1.00	None
Midgut	47 ± 4	4 of 4	0.10	Down
Tubule	250 ± 37	4 of 4	0.60	Down
Hindgut	437 ± 18	4 of 4	1.00	None
Heart	4004 ± 416	4 of 4	9.09	Up
Fat body	4452 ± 727	4 of 4	10.10	Up
Ovary	9 ± 1	4 of 4	0.00	Down
Testis	31 ± 1	4 of 4	0.10	Down
Male accessory glands	159 ± 12	4 of 4	0.40	None
Virgin spermatheca	340 ± 38	4 of 4	0.77	None
Mated spermatheca	315 ± 52	4 of 4	0.72	None
Adult carcass	1406 ± 120	4 of 4	3.20	Up
Larval CNS	458 ± 76	4 of 4	1.04	None
Larval Salivary gland	124 ± 8	4 of 4	0.28	None
Larval midgut	36 ± 2	4 of 4	0.08	Down
Larval tubule	212 ± 11	4 of 4	0.50	None
Larval hindgut	377 ± 45	4 of 4	0.86	None
Larval fat body	69 ± 6	4 of 4	0.20	Down
Larval trachea	211 ± 25	4 of 4	0.48	None
Larval carcass	63 ± 7	4 of 4	0.14	Down
S2 cells (growing)	4035 ± 17	4 of 4	9.16	Up
Whole fly	440 ± 107	4 of 4

Looking for X59545. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720