FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1622962_a_at:

>probe:Drosophila_2:1622962_a_at:626:369; Interrogation_Position=1028; Antisense; GAATGTGTTCGATCTGTTCCAGACC
>probe:Drosophila_2:1622962_a_at:583:413; Interrogation_Position=1049; Antisense; GACCAACGTAAGATCCGTCACGCAG
>probe:Drosophila_2:1622962_a_at:726:135; Interrogation_Position=1068; Antisense; ACGCAGCGCGGAGGCCTTGTCAAAT
>probe:Drosophila_2:1622962_a_at:446:325; Interrogation_Position=1151; Antisense; GCGAAAGCTGATGCCGCTGATCGAT
>probe:Drosophila_2:1622962_a_at:714:637; Interrogation_Position=1171; Antisense; TCGATAGCAGCTACGGTTTCAGTGA
>probe:Drosophila_2:1622962_a_at:402:477; Interrogation_Position=1186; Antisense; GTTTCAGTGAGCTGCCAAAGGCCTT
>probe:Drosophila_2:1622962_a_at:260:109; Interrogation_Position=1213; Antisense; AGAAGATGAAATCCGGGCACCTCCG
>probe:Drosophila_2:1622962_a_at:489:567; Interrogation_Position=732; Antisense; GGCACATTGGCCATACAAATCCTCA
>probe:Drosophila_2:1622962_a_at:434:161; Interrogation_Position=770; Antisense; ACAAGTTTTGGCAACCTGCAGCGAA
>probe:Drosophila_2:1622962_a_at:490:539; Interrogation_Position=809; Antisense; GGTTCGCAATTTGGGAGCCGATTTA
>probe:Drosophila_2:1622962_a_at:213:31; Interrogation_Position=844; Antisense; ATAACAACCCGCAGGCCATGGAGGA
>probe:Drosophila_2:1622962_a_at:239:615; Interrogation_Position=873; Antisense; TGCAAATACGCACCCTATGACATTG
>probe:Drosophila_2:1622962_a_at:636:681; Interrogation_Position=888; Antisense; TATGACATTGTGCTGGACTGCGCTG
>probe:Drosophila_2:1622962_a_at:17:375; Interrogation_Position=941; Antisense; GAAGTACGACTTTCGCCAGTACATC

Paste this into a BLAST search page for me
GAATGTGTTCGATCTGTTCCAGACCGACCAACGTAAGATCCGTCACGCAGACGCAGCGCGGAGGCCTTGTCAAATGCGAAAGCTGATGCCGCTGATCGATTCGATAGCAGCTACGGTTTCAGTGAGTTTCAGTGAGCTGCCAAAGGCCTTAGAAGATGAAATCCGGGCACCTCCGGGCACATTGGCCATACAAATCCTCAACAAGTTTTGGCAACCTGCAGCGAAGGTTCGCAATTTGGGAGCCGATTTAATAACAACCCGCAGGCCATGGAGGATGCAAATACGCACCCTATGACATTGTATGACATTGTGCTGGACTGCGCTGGAAGTACGACTTTCGCCAGTACATC

Full Affymetrix probeset data:

Annotations for 1622962_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720