FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1622991_s_at:

>probe:Drosophila_2:1622991_s_at:53:15; Interrogation_Position=4511; Antisense; ATTACTTCTTATTACTTTTGCTTCA
>probe:Drosophila_2:1622991_s_at:408:491; Interrogation_Position=4572; Antisense; GTAAATTGCCAAGTTCGTCCTATTA
>probe:Drosophila_2:1622991_s_at:686:249; Interrogation_Position=4581; Antisense; CAAGTTCGTCCTATTATATGCCAGA
>probe:Drosophila_2:1622991_s_at:630:339; Interrogation_Position=4740; Antisense; GCTAGGTTGATTTATAATGTCCATT
>probe:Drosophila_2:1622991_s_at:703:657; Interrogation_Position=4787; Antisense; TAAGTTTCAATTTATTTACGCCATA
>probe:Drosophila_2:1622991_s_at:262:431; Interrogation_Position=4850; Antisense; GAGTACATCTGGTACATCTTAAACA
>probe:Drosophila_2:1622991_s_at:646:709; Interrogation_Position=4868; Antisense; TTAAACAATCTCACAGGCACTCTAG
>probe:Drosophila_2:1622991_s_at:483:555; Interrogation_Position=4883; Antisense; GGCACTCTAGATATTTAGGTATTCG
>probe:Drosophila_2:1622991_s_at:16:381; Interrogation_Position=4907; Antisense; GAACCAATGTACTTATTTATCGATG
>probe:Drosophila_2:1622991_s_at:439:699; Interrogation_Position=4922; Antisense; TTTATCGATGACTTTTATGACTTTA
>probe:Drosophila_2:1622991_s_at:191:369; Interrogation_Position=4949; Antisense; GAATGTAAATACTTGCATCTACTGC
>probe:Drosophila_2:1622991_s_at:484:243; Interrogation_Position=5031; Antisense; AATATAACAGATAGCGGCCAATTGG
>probe:Drosophila_2:1622991_s_at:100:525; Interrogation_Position=5055; Antisense; GGGCATCACTCTTCATCGGGTACCA
>probe:Drosophila_2:1622991_s_at:631:273; Interrogation_Position=5063; Antisense; CTCTTCATCGGGTACCAGCAAGTTG

Paste this into a BLAST search page for me
ATTACTTCTTATTACTTTTGCTTCAGTAAATTGCCAAGTTCGTCCTATTACAAGTTCGTCCTATTATATGCCAGAGCTAGGTTGATTTATAATGTCCATTTAAGTTTCAATTTATTTACGCCATAGAGTACATCTGGTACATCTTAAACATTAAACAATCTCACAGGCACTCTAGGGCACTCTAGATATTTAGGTATTCGGAACCAATGTACTTATTTATCGATGTTTATCGATGACTTTTATGACTTTAGAATGTAAATACTTGCATCTACTGCAATATAACAGATAGCGGCCAATTGGGGGCATCACTCTTCATCGGGTACCACTCTTCATCGGGTACCAGCAAGTTG

Full Affymetrix probeset data:

Annotations for 1622991_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720