FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1623026_a_at:

>probe:Drosophila_2:1623026_a_at:437:581; Interrogation_Position=1091; Antisense; TGGCCCATTGGCAACTGTGGCATGT
>probe:Drosophila_2:1623026_a_at:402:23; Interrogation_Position=1155; Antisense; ATATCTACTACTCTTCGGAATCTGT
>probe:Drosophila_2:1623026_a_at:65:31; Interrogation_Position=1189; Antisense; ATAACGTTGTATGCGGCCGCGGGCT
>probe:Drosophila_2:1623026_a_at:204:571; Interrogation_Position=1210; Antisense; GGCTTTACGACATTCTATCCCAGTT
>probe:Drosophila_2:1623026_a_at:380:531; Interrogation_Position=1251; Antisense; GGTGTACAAGTATCTAATGCCCATC
>probe:Drosophila_2:1623026_a_at:214:51; Interrogation_Position=1267; Antisense; ATGCCCATCTATCATGACATTTCCA
>probe:Drosophila_2:1623026_a_at:8:483; Interrogation_Position=1310; Antisense; GTATACGTCACTTTGAGTACGCCGC
>probe:Drosophila_2:1623026_a_at:632:1; Interrogation_Position=1349; Antisense; ATCGCCGAGGTTACGGACTACCGAT
>probe:Drosophila_2:1623026_a_at:494:293; Interrogation_Position=1380; Antisense; CGCTTTGCTCAAACTTTTTTCGGAT
>probe:Drosophila_2:1623026_a_at:249:361; Interrogation_Position=1411; Antisense; GAATTTCCCTATGTAGACCAGTGCT
>probe:Drosophila_2:1623026_a_at:536:103; Interrogation_Position=1425; Antisense; AGACCAGTGCTACCTCATGTGGCAT
>probe:Drosophila_2:1623026_a_at:126:537; Interrogation_Position=1464; Antisense; GGTCCTGCAACGCATCGATAATCTG
>probe:Drosophila_2:1623026_a_at:602:229; Interrogation_Position=1507; Antisense; AATGGTGTCTCCACAGCATGATAAC
>probe:Drosophila_2:1623026_a_at:336:563; Interrogation_Position=998; Antisense; GGAACCGTGGATTTAGCTCCGATGA

Paste this into a BLAST search page for me
TGGCCCATTGGCAACTGTGGCATGTATATCTACTACTCTTCGGAATCTGTATAACGTTGTATGCGGCCGCGGGCTGGCTTTACGACATTCTATCCCAGTTGGTGTACAAGTATCTAATGCCCATCATGCCCATCTATCATGACATTTCCAGTATACGTCACTTTGAGTACGCCGCATCGCCGAGGTTACGGACTACCGATCGCTTTGCTCAAACTTTTTTCGGATGAATTTCCCTATGTAGACCAGTGCTAGACCAGTGCTACCTCATGTGGCATGGTCCTGCAACGCATCGATAATCTGAATGGTGTCTCCACAGCATGATAACGGAACCGTGGATTTAGCTCCGATGA

Full Affymetrix probeset data:

Annotations for 1623026_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720