FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1623031_a_at:

>probe:Drosophila_2:1623031_a_at:728:167; Interrogation_Position=4245; Antisense; AAATGGATATCCCAAGCGATCGCCC
>probe:Drosophila_2:1623031_a_at:509:419; Interrogation_Position=4278; Antisense; GAGCTTCTATGATTTGGGATTCCGC
>probe:Drosophila_2:1623031_a_at:113:505; Interrogation_Position=4309; Antisense; GTGCCGGGCGATTTTACCGAATCAG
>probe:Drosophila_2:1623031_a_at:546:95; Interrogation_Position=4334; Antisense; AGATCGACAACGCTCTGGACACTCT
>probe:Drosophila_2:1623031_a_at:458:157; Interrogation_Position=4352; Antisense; ACACTCTCTATACGCGATCCGTGAA
>probe:Drosophila_2:1623031_a_at:267:263; Interrogation_Position=4399; Antisense; CAGCTGCAATATGTGGCCCATGGAT
>probe:Drosophila_2:1623031_a_at:430:269; Interrogation_Position=4417; Antisense; CATGGATTGGCTGCTGTGGCCTACA
>probe:Drosophila_2:1623031_a_at:379:581; Interrogation_Position=4449; Antisense; TGGCCAGTGCTGCAATGCGGATTTT
>probe:Drosophila_2:1623031_a_at:201:685; Interrogation_Position=4503; Antisense; TATCGTGCGCAACTACTTTGCCAAT
>probe:Drosophila_2:1623031_a_at:166:695; Interrogation_Position=4519; Antisense; TTTGCCAATGACTACCCACAGGATC
>probe:Drosophila_2:1623031_a_at:710:25; Interrogation_Position=4555; Antisense; ATAGAGCCAAGTAACGTGCCGGATG
>probe:Drosophila_2:1623031_a_at:228:705; Interrogation_Position=4634; Antisense; TTACCGGACGTAATATTGCGCGCAT
>probe:Drosophila_2:1623031_a_at:196:323; Interrogation_Position=4651; Antisense; GCGCGCATCTTTCATGGCATCATGA
>probe:Drosophila_2:1623031_a_at:214:583; Interrogation_Position=4717; Antisense; TGGCGTGCCCACGTCAAAGTGGATT

Paste this into a BLAST search page for me
AAATGGATATCCCAAGCGATCGCCCGAGCTTCTATGATTTGGGATTCCGCGTGCCGGGCGATTTTACCGAATCAGAGATCGACAACGCTCTGGACACTCTACACTCTCTATACGCGATCCGTGAACAGCTGCAATATGTGGCCCATGGATCATGGATTGGCTGCTGTGGCCTACATGGCCAGTGCTGCAATGCGGATTTTTATCGTGCGCAACTACTTTGCCAATTTTGCCAATGACTACCCACAGGATCATAGAGCCAAGTAACGTGCCGGATGTTACCGGACGTAATATTGCGCGCATGCGCGCATCTTTCATGGCATCATGATGGCGTGCCCACGTCAAAGTGGATT

Full Affymetrix probeset data:

Annotations for 1623031_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720